Lactuca sativa (garden lettuce): 111910736
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Entry
111910736 CDS
T05352
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111910736
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111910736
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Ig_DR_A0283-like
Motif
Other DBs
NCBI-GeneID:
111910736
NCBI-ProteinID:
XP_023762329
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Position
4:304097944..304108032
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AA seq
677 aa
AA seq
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MGKKKEMLLATRILVFAVLEFFIYTADCKRSVSTKKGLRSNSEGSVLYPPVQLHINDDQV
VVDNGIFSISILSPEGTVTSINYNGIDNILNDHNGINDRGYWDVNWSDPFDSKDNLDKLA
GDELDVVVNNENQVELSFKRHWMFSRKNSHVSLNIDKRFIILRGTSGFYSYGIFDRPKGW
PDVDVYQGRIVFKLQERLFRYMAVSDERQRVMPTSEDRKRGEPLDYPEAVLLTHPSNSLL
KGEVDDKYQYSTENKDNRVHGWMCSDPPVGFWMITPSNEFRTAGPVKQDLTSHAGPVTLS
MFFSTHYAGIDLGMKFREGEPWKKVFGPVFIYLNSVTTEDNPLSLWSDAKEEMLIQTESW
PYEFPNSLDFLRAQQRGLVTGRLFVRDVELARASFAYIGLAPPGTLGSWQQENKGYQFWT
QTDSEGYFEIKNVRPGSYNLYAWVPGYIGDYMYNSVVNVLEGSRIRMGILVYEPPRNGPT
IWEIGVPDRTAAEFYVPEPNPTLMNNLYANQRTESFRQYGLWERYTELYPYRDLVYRVGV
NEYQTDWFFAHVTRNVGNKTYLPTTWTIFFDLEDVGSTGNYTIQLALASATVSELQVRIN
DPRGVLPFFTTGLIGKDNAIARHGIHGLYWLYSINVLSSQLRVGRNALYLTQARGLGPFR
GVMYDYIRLEGPPQSYN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagaaggaaatgttgttagcaacaagaatattagtttttgctgttcttgag
ttcttcatctatactgctgactgcaaacgctcagtctctacaaaaaagggtttaaggagc
aattcagaaggttcggtattatatcctccggtgcaattgcatatcaacgatgatcaagtg
gtagttgacaatggcatttttagcatcagcattttgagtcctgaaggcacagtcaccagt
ataaactataatggaattgacaatatcttaaatgatcacaatggaatcaatgatcgagga
tattgggatgtgaattggagtgatccatttgattcgaaggataatttggacaaacttgca
ggcgatgagttagatgttgtagtgaacaacgagaatcaagtggaactatcattcaaacga
cattggatgttttctcggaaaaacagccatgtttccttgaatattgacaaaaggtttatt
atcctacgaggaacaagcggcttctactcttatgggattttcgatcgtccaaaaggatgg
cccgatgtcgatgtctaccaaggtcggatcgtgttcaagcttcaagaaagattgtttcga
tatatggctgtttcggatgaaaggcaaagggttatgcctacttctgaagatcgaaagagg
ggtgaacctctagactaccctgaagctgtacttttgacccatccttccaattctcttctc
aagggagaggtggacgacaaataccaatactcaactgaaaataaagacaaccgggttcac
ggttggatgtgttccgacccgcctgttgggttttggatgatcactccaagtaatgagttc
cgtacagctggcccggtcaagcaagatctcacatctcatgcggggcccgttactctatcg
atgttttttagcacacattatgccgggattgatttaggaatgaaatttcgagagggtgag
ccatggaaaaaggtttttggacccgtgtttatatatctcaactcggtaacaacggaagat
aaccctctttcgctttggtctgatgctaaagaagagatgctcatacaaaccgagagttgg
ccatatgaattcccaaactctttggactttcttcgtgcccagcaacgtggtctagtaact
ggaagactattcgtccgtgatgtagagttggctcgtgctagctttgcctacattggcttg
gctccacctggtactctaggatcatggcaacaagaaaacaagggttatcagttttggact
caaactgacagtgaaggttacttcgaaatcaaaaatgtccgccctggttcctataacttg
tatgcttgggttcctgggtatatcggggattacatgtacaactcagtcgtcaatgtcttg
gaaggaagtagaatcagaatgggtatccttgtatacgaaccaccaagaaatggtcctaca
atctgggaaatcggtgtcccagatcgaacagcagctgagttctacgtgcctgaaccaaac
ccaacccttatgaacaacttatatgcgaaccaaagaacagaatcgtttaggcaatatggc
ttatgggaacgttacacggagctctacccttatcgggatttggtctacagggttggtgtt
aacgaatatcaaacagattggttttttgctcatgtaactagaaacgtgggaaataagaca
taccttccgactacttggaccattttctttgatcttgaagatgttggatctactgggaac
tatacaattcaactagcattagcatcagctacagtttcagaattgcaagttcggatcaat
gacccaagaggggtcttgcctttctttacaacagggcttattgggaaggataatgcgatt
gcacgacatgggattcatgggctatattggctgtatagtatcaatgttttgtcttctcaa
cttcgagtaggcaggaacgcattgtatttaacacaagcaagaggcttgggtccttttaga
ggagtcatgtatgattatattcgtctagaagggccccctcagtcatacaactga
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