Lactuca sativa (garden lettuce): 111910738
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Entry
111910738 CDS
T05352
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111910738
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111910738
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
111910738
NCBI-ProteinID:
XP_023762332
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Position
4:complement(303325699..303330700)
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AA seq
666 aa
AA seq
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MGIWSSFRTVITSVCTCGGGNHHEGLGPMSCMGVRLRIQDHHVVIDNGILQVTLSKPEGL
VTGVRYNGLDNILEVLNHEGNRGYWDVVWSALDDSGRKGVFEVIKGTSFKVIVETEEQVE
VSFSRPWDPSLRGKVAPINIDKRFVLLRGSSGFYSYAIYEHLGSEEWQAFSLGETRIAFK
LRKDKFHYMAVADDRRRYMPLPEDRLPGRSQPLAYQEAVSLVNPVVPAFKGEVDDKYQYT
CENRNLMVHGWISNDPPVGFWQITPSNEFRTGGPLKQNLCSHVGPTCLAVFVGAHYAGDD
LVPKFGQGEPWKKVFGPVFMYLNSTMCGQDPLTLWDDAKRQMTVEVESWPYSFPASRDFP
KSHDRGNVRGRLLVRDRYIHKDDIPANGAYVGLAPPGDVGSWQRECKDYQFWSEADGRGD
FCIKNIRGGEYNLYGWVPGFIGDYRYHVPITITPGCDIYVGDLVYEPPRDGPTLWEIGIP
DRSAAEFHVPDPNPNYINPLFLNNPNSNFRQYGLWERYAELYPHQDLVFTIGESDYRKHW
FYAQVPRRKQDNSYEGTTWQIKFKLQNLQRAIYKLRIALAGASLAEVQVRVNDPNKPRPV
FTTGLIGRDNAVARLGIHGLYWLYNIDISGSLLVEGENTIYLKQPRNQSPFQGIMYDYIR
LEGPPC
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttggagtagcttcagaacagtgattactagtgtctgcacctgtggaggaggg
aatcatcacgagggacttggaccaatgtcttgtatgggtgtacgattgcggattcaagat
catcatgtggtgattgataatggcatactgcaagtgacattatcgaaaccagaaggcctt
gtgactggggtacgatacaatggccttgacaacatccttgaggttcttaatcacgaaggt
aacagagggtattgggacgttgtgtggagtgctctagatgactcgggaagaaaaggagta
tttgaagtgatcaaaggaacaagctttaaggttatagtggaaacagaggaacaagtagag
gtgtctttttcaagaccttgggatccttcccttcggggaaaagttgctcctataaacata
gacaagaggtttgttctgcttcgtggttcctccggtttctattcgtatgccatttatgaa
cacttgggttctgaagaatggcaagctttcagtcttggagaaacgcgaattgcattcaaa
cttagaaaagacaagtttcattacatggcagtagcagatgatagaagaagatacatgccc
ttgccagaggaccgactaccaggaagatcccagccccttgcctaccaggaagctgtttca
cttgtcaacccagtcgtgcctgccttcaaaggagaggtggatgacaagtatcagtacact
tgtgaaaacaggaacctcatggtgcatggctggatatccaatgatcctccagtagggttt
tggcaaattacacccagcaatgagttccgcactggtggcccactcaagcagaatctctgt
tcccatgtgggccccacttgcctagctgttttcgttggtgctcattatgctggggatgat
ttagtcccaaaatttgggcaaggtgagccatggaaaaaggtgtttggtccggttttcatg
tatctaaattcaacaatgtgtggccaagatcctcttacactttgggatgatgcaaaaaga
cagatgacggttgaagtggagagttggccgtatagctttccagcgtccagggatttccca
aaatcacatgaccgaggaaatgttagaggcagattacttgttagagacagatacattcac
aaggatgacataccagcaaatggtgcctatgttgggttagctccaccaggagatgttgga
tcatggcaaagagaatgcaaggattaccagttctggagtgaagcagatggcaggggtgat
ttctgcattaagaatataagaggtggagaatataatttgtatggttgggtgcctggattt
attggagattaccgatatcatgttcccattaccatcaccccagggtgtgatatttacgtg
ggggatcttgtttatgagcctcccagagacggtcctacgttatgggaaatcgggatccca
gaccggtctgctgcagagttccatgtcccagatcctaaccctaactacatcaacccactt
ttcctcaataatcccaacagcaactttaggcagtatggcttatgggaaaggtatgcagag
ttataccctcatcaagacttggtattcaccattggggagagcgattatcgcaaacactgg
ttttatgctcaagttccaaggagaaaacaagacaattcatatgaaggaaccacatggcaa
ataaagttcaaactccagaatctccagcgtgctatatataagttacgcatagcacttgct
ggggcatctcttgcagaagtacaggttcgggtaaatgatccaaacaagcctcgtccagtg
tttacaacaggactgataggaagggataatgcagttgcgagactagggattcatgggcta
tattggctatacaacatagacatttcaggctcgctacttgttgaaggagaaaacactatc
tatctgaaacaacccaggaaccaaagcccatttcaaggtattatgtatgattacatacgt
ctagaaggcccgccttgctaa
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