KEGG   Lactuca sativa (garden lettuce): 111910985
Entry
111910985         CDS       T05352                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111910985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsv03041]
    111910985
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111910985
Spliceosome [BR:lsv03041]
 Complex B
  Other components
   Prp19 complex
    111910985
 Complex C
   Prp19-CDC5 complex
    111910985
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    111910985
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 111910985
NCBI-ProteinID: XP_023762520
LinkDB
Position
8:4771617..4775799
AA seq 886 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDNRHRKRKRKGIDYNAEIPFEKRPPPGFYDVADESSIVEQPKFPT
TIEELEGERRADKEARLRKQDIARNKIAQRQDAPSAILQANKMNDPETVRKRPKMNLPTP
QIPDYELEHIAKFGLPALTDELSEGSGATRALLADYTQTPRQTPLRTPQRTPAGKQDAIM
MEAENQARLRLSQTPLLGGENPDLHPSDFSGVTPKKKEIQTPNPMLTPGATPGGMGLTPR
IGMTPGQSFGVTPKGTPIRDELHINEEMEMHDNAKIVRRNLRSGLTGLPQPKNEYQIVIQ
PIPEENDEEQEVKMEEDMSDRIAREKAEEDARQLALLKKRSKVLQRELPRPPGGAVDLIK
KSLIRGDEDKSSFVPPTLIEQADEMIRKELLVLLEHDNVKYPIDEKIEKEKKKGNKRAGG
KSVSIPVIEEFDEDELKEADKMIKEEASFLKVAMGHENEDIDEFVEAHKTCINDIMFFPT
RNSYGLSSVAGNMEKLAAFQDEFENVKKRMDDDTRKAQRLEQKIKLLTNGYQMRGGKIWS
QVEATFKQMDTAGTEYECFQALKRQEQVASVNRINSIWEDVQKQKELEKSLQKRYGDLIV
EQERIYHLMENYRKEEAAKQEITETKMAEAEEVLVEMTKPPLNNDDESANEPMDVSEPPT
PTATVEVDVVAPPEDTEKQASAVDVEVEKNETNEPENAMVDEIIES
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgaggataatgataaagggcggtgtttggaagaacaccgaggacgagatcctcaaggct
gctgtaatgaaatatggaaagaatcagtgggctagaatctcttcgttactcgttcgcaaa
tcagctaagcagtgtaaagctcggtggtacgagtggctcgatccttcaatcaaaaagact
gagtggaccagagaagaagatgagaagctccttcatcttgcaaaacttatgccaactcaa
tggagaacaatcgcccccattgtgggccgtactccatcacaatgtctagaacgttacgag
aagcttctagatgcagcatgtgcaaaagatgaaaattatgaaccaggtgatgacccacgg
aagcttcgacccggagagatcgacccaaacccggagtccaaacccgcccggcccgacccg
gttgacatggacgaagacgaaaaggaaatgctttcagaagcccgggcccgtttagccaac
acccgtggaaaaaaggccaaaagaaaagcccgtgagaaacagttggaagaagctagaaga
ctcgcttcattacagaaaagaagagagttaaaagcagctggaattgataatagacataga
aagagaaagagaaaggggattgattacaacgcagaaatcccatttgagaaaagacctcca
cctggcttctatgatgtagctgatgaaagctcaatagttgaacaaccgaaattcccaact
acaattgaggagttagagggcgaaaggcgagctgataaagaggctcgtttgagaaaacaa
gatattgctagaaataaaattgcccaaagacaagatgctccatctgcaattcttcaagca
aataagatgaatgatccagaaactgtcagaaaaagacccaaaatgaatctcccgacccca
caaatccctgactatgaactcgaacacattgcaaagttcggtcttccggctttgaccgac
gagttgtcggaaggaagcggcgccacgcgggcgcttcttgctgactacacccaaacccca
cgtcagacaccgctaaggaccccgcaaagaacgccagctggcaagcaagacgcgattatg
atggaggccgagaatcaggcgaggttaagactgtctcaaacaccgttactcggaggcgaa
aatcccgatttgcatccttcggatttttccggggtgactcccaagaaaaaggagattcag
acgccgaatcccatgttgacacctggcgcgacacctggcggtatgggccttacacctaga
atcggaatgacacctggacaatcttttggtgtcactccgaaagggactccgattcgggat
gaattacatataaatgaagagatggaaatgcatgataatgctaagatcgtgagaaggaat
ttgaggtcgggtttgaccggtcttccacagcctaaaaatgagtatcagatagtgattcag
ccgattccagaagagaatgatgaagagcaggaagtgaaaatggaagaagatatgtctgat
aggattgcgcgtgagaaggcggaggaagatgctcgccagctggcgttacttaagaaaagg
tcgaaggtcttgcagagggagcttcctaggccgccaggtggcgcggttgacttgataaag
aagtctttgataagaggcgatgaagataagagctcttttgttccacctactttgatcgag
caggctgatgagatgataaggaaggagcttttggtgttgctggaacatgataatgtcaag
tatccgattgatgaaaagattgaaaaagagaaaaagaaaggcaacaaacgtgcaggtgga
aagtctgtttccattcctgtcattgaagagtttgatgaagatgaactcaaggaggctgat
aaaatgatcaaagaagaggcgagtttcttgaaagtagcaatgggacatgagaatgaggac
attgatgagtttgttgaagcacacaaaacatgcataaatgacatcatgttttttcccacc
cgaaattcttatggtctctctagtgttgctggaaacatggagaagcttgctgcatttcaa
gatgaatttgaaaatgtgaaaaagagaatggatgatgatacaagaaaagcacaacgcctt
gaacagaaaataaaacttctcacaaatggataccagatgcgaggtggaaagatttggtcg
caagtggaggcgacatttaagcagatggatacagctggcacggaatatgaatgcttccaa
gctttaaaaaggcaagaacaggtggcgtctgtgaaccggattaatagcatatgggaagac
gtgcaaaagcaaaaggagttggagaaatctttacagaaacgatatggggatttgattgtt
gagcaagaaaggatttatcatcttatggaaaactacagaaaagaagaagcagcaaaacaa
gaaattacagagacaaaaatggcggaagctgaggaggttcttgttgaaatgacgaaaccg
cccttgaataatgatgatgaatctgctaatgaacctatggatgtttctgaaccacccacg
cccacggccactgttgaagttgatgttgtagcaccaccagaagacactgaaaagcaagct
tctgctgttgatgttgaagttgaaaaaaatgaaactaatgagcctgaaaatgcaatggtg
gatgagattattgagagttaa

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