Lactuca sativa (garden lettuce): 111910998
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Entry
111910998 CDS
T05352
Name
(RefSeq) protein PELOTA 1
KO
K06965
protein pelota
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111910998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111910998
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111910998
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
111910998
NCBI-ProteinID:
XP_023762533
LinkDB
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Position
8:4108719..4112795
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AA seq
378 aa
AA seq
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MKIVRRDFVPNGPGSVKMIPDESDDLWLAYNLIAPGDTVMAVTIRKVLREAASGSREAER
VKLKLEIKVENVDYDKEGAVLRIRGKNILENEHVKIGQFHTLEIELHRPFVLRKVLWDSL
TIDALQQAADPSASADLAVVLMQEGLAHILLVGKSVTITRSRIEASIPRKHGPSVAGYDK
ALNKFYENVLQAFVKHIDFKVVRCAVIASPGFSKDQFHRHLMLEAERRNLRDIIENKSRI
ILVHSTSGYKHSLREVLDAPNVMNIIKDTKAAQEVRVLKDFFTMLTNDPHRACYGPKHVE
VAHERMAVQTLLITDDLFRSSDVATRQKYVNFVNTVKDSGGNAHIFSSMHVSGEQLAQLT
GIAAILRFPLPDLDDIEM
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttcggagagattttgttcccaatggccctggcagcgtcaagatgattccc
gatgaatcagacgatttgtggctcgcttataatttaattgcgccgggtgatactgtcatg
gctgttacaatcagaaaagttcttagagaagcagcttctggatcaagagaagcagaacgt
gtgaaactaaaacttgaaatcaaagttgagaatgttgattatgacaaggaaggtgctgta
ctgagaatacgtgggaagaacattctagaaaacgaacatgttaaaatagggcagtttcat
acacttgaaattgaactgcatcggccttttgtgttaagaaaggtgttatgggactcactc
accatagatgcacttcaacaagctgcagatccttctgccagtgctgatctggcagtggtg
cttatgcaagaaggattggcacatattctccttgtgggtaaaagtgtgaccataacccgt
tctcgaatagaagcttcaattcctcgcaagcatgggccttctgtagctggttatgacaaa
gctttgaataagttctatgagaatgtcctacaggcatttgtgaagcatattgacttcaag
gttgttcgatgtgctgtaattgcaagtccaggattcagtaaggaccaatttcatcggcat
ttaatgttggaagcagaaaggagaaatttgagggacataattgagaacaaatcacgcatc
attcttgtacactccacttcaggatacaaacatagtttaagagaggttcttgatgctcca
aatgtgatgaatattatcaaagatacaaaagcagcccaagaggtgcgagttctcaaggat
ttcttcactatgcttactaatgatccacatcgtgcatgttatggaccaaagcatgttgag
gttgcccatgaaagaatggctgttcagacattacttatcactgatgaccttttcaggagt
tctgatgtagcaacaaggcaaaaatatgtgaattttgtcaacacggtcaaagactctggg
ggcaacgctcatatcttttcgtccatgcatgtttctggggagcaactggcacagctgaca
ggaattgctgcaatacttaggttcccattgccagaccttgacgatattgagatgtga
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