Lactuca sativa (garden lettuce): 111911016
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Entry
111911016 CDS
T05352
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111911016
Enzymes [BR:
lsv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
111911016
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111911016
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
111911016
NCBI-ProteinID:
XP_023762554
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All DBs
Position
1:11128491..11135310
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AA seq
613 aa
AA seq
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MAIKGKKSQKKPNRKEIVSVKSKKKNDILSESDMEDEELEQQQSINSDEGGDSGSELSLD
GDDTYARDVLGGNDDEVKGSGSDSELDSGSDSELDSGSDSDRDPQAESAAIDRESAIVQQ
EGQDELQLNIKEQPDEFRLPTQEELEEEACGPPDLTGLQQRIKEIVRILSNFSSLRQEGA
TRKQYIEQLKLDLGSYYGYNEFLISSFVEMFPPVELMELIEAFEKPRPITLRTNTLKTRR
RDLAGVLLNRGINLDPLSKWSKVGLVVYDHQVPYGATPEYMAGHYMVQSASSFLPVMALA
PQEKERIVDMAASPGGKTTYIAALMKNTGIIYANEMKEKRLSKLTSNLQRLGVTNTVVCS
YDGKELPKVLGHNTADRVLLDAPCSGTGVISKDESVKTSKNAIDVQNFSRLQKELILAAI
DMVDANSKSGGYVVYSTCSLMVIENEDVIDYALKKRDVKLVPCGLDFGRPGFVRFRERRF
HPSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKGVPGTYSEVQEEEEEEVEEGSEIMEEEI
PQQKQKKEVLRKEKKNSNDASLKRKKQEEKPATFEKRKKYKPPPREEISKAREEKREALR
EAKKKTKSSIKKR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctattaaaggcaaaaagtcacagaagaaaccaaacagaaaggagattgtttctgtc
aagagcaaaaagaaaaatgatattctgagcgagtctgatatggaagacgaagaactggaa
caacagcagagtatcaatagtgatgaaggtggggattcggggtcggaactttcgttggat
ggggatgatacatatgcacgcgatgttttaggaggcaacgacgatgaagttaaggggtca
ggttcagattcggaattggattctggatctgattcggaattggattccggttctgattcc
gatcgtgatcctcaggcagaatctgcagctatagacagagaaagtgcgatagtacaacaa
gagggacaagatgagctacaacttaatatcaaagaacaacctgatgagtttcgattgcca
acacaggaggaacttgaagaggaagcctgtggaccccctgatctcaccggtctccaacaa
agaataaaagagattgttaggattctctcaaattttagttctttgaggcaagagggagca
acaagaaagcagtatatagagcaacttaagttggacttaggatcatattatggctacaat
gagttccttatttcttcatttgttgagatgtttccacctgttgaacttatggaactaatt
gaagcttttgaaaagcctcgaccaatcaccctacgtaccaatacattaaagacacggaga
cgagacttggctggtgttttgttgaatagaggtatcaacttggatcctttaagcaagtgg
tcaaaggttggcttggttgtatatgatcatcaggtgccatatggtgcaactccagaatat
atggctggtcattatatggtgcaaagcgcaagctcttttctacctgtaatggcccttgct
cctcaagagaaggaacggattgttgatatggcggcatctcctggtggtaaaaccacatac
attgcagctcttatgaaaaacactggtattatttatgctaatgagatgaaggagaagagg
cttagtaaactaacatctaatttacaacgattgggtgttacaaatactgtagtatgcagc
tatgatgggaaggagctcccaaaagtattgggacataacacagcagacagggttttgttg
gatgccccttgcagtggtacaggggttatatctaaagatgaatctgtcaaaacctctaaa
aatgccattgatgtacagaacttctcacgtctacaaaaggaactaatacttgcagcaatt
gacatggtggatgcaaattcaaaatcagggggttatgtggtttactccacatgctccttg
atggttattgagaatgaagatgttatagactatgcactgaagaagagggatgtaaaactc
gtgccatgtggactagattttggtcgcccagggtttgttcgatttagggaacgcagattt
catccatcattggaaaagacaagacgtttctatccacatgttcataacatggatggcttt
tttgttgcaaagttgaaaaaaatgagtaattcaaagggagttcctggaacatattctgaa
gtacaagaagaagaagaagaagaggtggaagaaggttctgaaatcatggaagaagaaatt
cctcaacaaaaacaaaagaaagaggttctgagaaaagagaaaaaaaactcaaatgatgct
tctcttaaaagaaaaaaacaagaagaaaaacctgccacttttgagaagaggaagaaatat
aaacctcctcctagagaagagatctcaaaagccagggaagagaagagagaagctctaaga
gaagcaaagaagaaaacaaaatcctcaatcaagaaaaggtag
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