Lactuca sativa (garden lettuce): 111911139
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Entry
111911139 CDS
T05352
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03440
Homologous recombination
lsv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111911139
03460 Fanconi anemia pathway
111911139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111911139
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111911139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
UBA
DUF1421
UBA_3
UBA_9
DUF6429
Motif
Other DBs
NCBI-GeneID:
111911139
NCBI-ProteinID:
XP_023762723
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All DBs
Position
9:58426723..58430348
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AA seq
637 aa
AA seq
DB search
MDRVVCPENAELVEFMLKKQKEMVDLSENNVKTISKACLKVCSSKTPIKTLKDFSNVKGV
GNWILRIMKGFFVDEAEDEEIIESGKRKKGNKQYVPQKNSAAYALLITLYRGTSNGSNFM
RKQELIDAAEASGLSRSPIMPEIGKGKAGQFGVSSGRDWYSGWNCMKKLIDKGLAVKSSN
PAKYMLTEQGKEAARDCMLRSGLVDSTDDLATLDKTSDLTQKNLKDSVCIDAELVDDVAS
RHVSSSLQKKPVEIPPDTVDKLVRMGYSKEQVIRAFSEVSKKSPNEEPSSLWLSVLCCLR
EVEVYSSPLTSQNVPKVKHHHPSSNSFTHKETTQLPTSIKPCSSSVNDENVRKRSRNVLE
AKSNVLSMPPLTLGDRFEDVYEVVLILDDREKFTKESRSRKLLENIRLHFKIPIEVRRLP
VGDGIWIARHKHIGSEYVLDFIVERKNVDDLRSSIRDNRYKEQKVRIMRCGLKRLIYLVE
GDPNALESAESIKTACLTTEILEGFDVQRTSGLGDTLRKYGYLTQSITQYYKSLGNEGEH
VDFPICPPFDQFIERCQELDKMTVSDVFATQLMQAPQVTEDVAIAVLDLYPTVSSLARAY
SHLDGDTCAQEELLKKQSNNVINGVASRNIFQFIWGG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagtagtgtgtcccgaaaatgcggagctcgtggagttcatgttgaaaaaacaa
aaggaaatggtggatttatcggagaataacgttaagacgatatcgaaggcctgcttgaag
gtgtgcagttccaagaccccaatcaaaaccctaaaggacttctccaatgtcaaaggtgtt
ggaaattggatcttgagaatcatgaaaggtttctttgttgatgaagctgaggatgaagag
ataatagaaagtgggaaaagaaaaaagggaaacaagcaatatgtgcctcaaaagaactcc
gcagcttatgctttattgatcactctttacaggggaacatctaatggaagtaattttatg
cgaaaacaagagctaattgatgctgctgaagcaagtggattgtctcgctcacctataatg
cctgaaataggtaaggggaaagcaggccagtttggagttagctcaggcagggattggtat
agtggatggaattgcatgaaaaagttgatagataaagggttggctgtaaaatcaagtaat
cctgcaaaatacatgctgactgagcaaggaaaagaagctgcacgtgattgtatgttgaga
tctggattagttgattctacagatgatcttgctactttggataaaacttcagatttaacc
caaaaaaatctgaaagattcagtgtgcattgatgctgagttggttgatgacgtggcatct
aggcatgtttcttcaagtttgcagaaaaaaccagttgagattcctccagatactgttgat
aagcttgtgagaatgggatactcaaaagaacaagtaatccgtgctttttctgaggtctca
aaaaagtcaccaaatgaagagccttcttcactttggctatctgttttatgttgtcttcgt
gaagtcgaagtctacagttcacctttgacttctcaaaatgttccaaaagtcaaacatcat
catccgtcatcaaattctttcactcataaagaaaccacacaactcccgacttcaatcaaa
ccttgttcatcatctgtaaatgacgagaatgtgaggaagagaagtaggaatgttctagaa
gctaaatcaaatgttctatcaatgccacctttgacacttggggaccgattcgaggatgta
tatgaagtggttttaatattagatgatcgggaaaaattcaccaaggagtcaaggtctaga
aagcttcttgagaatatccgactccattttaagatacctatagaggtgaggcgattacct
gtgggagatggaatttggatagctagacataaacatattggtagtgaatatgttcttgat
tttattgttgaaagaaaaaatgttgatgatttaagatcttccattagagataatcgttac
aaagagcagaaagttcggatcatgaggtgtgggctcaaaaggttgatatacctagtagaa
ggtgatccgaatgctttggaaagtgctgaaagtattaaaacagcatgtttgacaaccgaa
attttagaggggtttgatgtacagagaacaagtgggttgggagatacactaagaaaatac
ggttatcttacacaatcaataacacaatattacaaatctcttggcaatgagggggaacat
gtagatttcccaatttgccctccgtttgatcagtttattgagaggtgtcaagagttggat
aagatgacagttagtgatgttttcgccacccagctcatgcaggctccacaggtgactgag
gatgttgccattgctgtgcttgatttatacccaacggtttcatcacttgctcgtgcctac
tcgcatcttgatggtgacacgtgtgcacaagaggagcttctcaagaagcagagtaacaat
gtcatcaatggagttgctagtaggaacattttccaatttatttggggtggttga
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