KEGG   Lactuca sativa (garden lettuce): 111911258
Entry
111911258         CDS       T05352                                 
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lsv03016]
    111911258
Transfer RNA biogenesis [BR:lsv03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    111911258
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Nucleoporin_N DUF6786
Other DBs
NCBI-GeneID: 111911258
NCBI-ProteinID: XP_023762815
LinkDB
Position
8:60310392..60314168
AA seq 815 aa
MVQNAAVGVERVFIGGGCNRIVNNVSWGACGLVSFGSQNAVSIFSPQTAKILTTLPGHKA
SVNCTHWLPSNKFAFKAINWEKHYLLSGDAEGVIILWEFSLSENKWRNVSQLLQSHKKGV
TCITAILTSQTEAIFASTSSDCVLNIWKIVLPSFGGECTITCLDSLSTGLKPMVTLSLAE
LPGNPTHLILAMGGLDNKIHLYCSDSTQKFVRTCELKGHTDWIRSLDFSLPVETNNLLLV
SSSQDKGIRIWKLSLCNLDKKKAENSLAYYIKGPVFVSGSFSYQVSLESLLIGHEDWVYS
VEWQPPSLSCYQPQSILSASMDKTMMIWQPERTTGIWVNVVTVGELSHSALGFYGGHWSP
NGDSILAHGYGGSFHLWKNVGDDIDNWKPQKVPSGHFAAVMDVVWGRGGDYLMSVSHDQT
SRIFASWLNEANTWHEIARPQVHGHDINCLTIIKGKGNYKFVSGADEKVARVFEAPLSFL
KTLSHATSCLHDFEDLHVDDVQALGANMSALGLSQKPIYAQASSERTTDGIGNEGFDTME
TIPDAIPSVLTEPPIEEQLAWHTLWPESHKLYGHGNEIFSLCCDHQGKLVASSCKAQSAS
VAEIWLWEVGSWKAVGRLQSHTLTVTRMEFSHDDKYLLAVSRDRHLSLFSIDRTGGMDGI
SYKLVTRQEAHKRIVWACSWNPSPFTHQFATGSRDKTVKIWEVNKSSSTIQLLITLPTFK
TSVTSLSWTTPNPVDNNGIIAVGMESGLIELWNLCFTKNQKDSSLVIQFDPFMCHVSSVN
RLAWRDVEKKDDCESMELASCGADHCVRIFKVTLV
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggttcaaaatgcagcagtgggtgtggagagagtattcataggaggaggatgcaatcga
attgttaacaacgtttcctggggtgcctgtggtttagtttcattcggctctcaaaacgcc
gtctccattttttctcctcagactgcgaagatattaactacgctaccaggtcataaagct
tcagtcaactgtactcattggcttcccagcaacaaatttgcatttaaagctattaattgg
gagaaacattatctactctctggagatgctgaaggagtcatcattctgtgggagttctct
ctatcagaaaacaagtggagaaatgtatcacaactgctgcagtcacacaagaaaggcgtc
acgtgcattactgcaattctgacatctcaaactgaagcaatatttgcatccacctcttct
gattgtgtgcttaacatttggaaaatagtcttaccttcttttggaggtgaatgtacaatc
acgtgcttggattccctctctactggtttaaaaccaatggttacactttcactagcagaa
ctaccaggaaatcccacacaccttattctagcaatgggaggacttgacaacaagattcat
ttatattgcagtgattcaacacaaaaatttgttcgtacatgtgagttaaaagggcataca
gattggatcagaagcttagacttctcattacctgtagaaacaaacaatcttctccttgtt
agctcttctcaagataaaggcatacgcatatggaaattgtctttatgcaatttagacaaa
aagaaagcagaaaacagcttggcttattacataaaagggcctgtatttgtatcaggttct
ttctcctatcaagtgtctttagaatctcttctcattggtcatgaagattgggtatattca
gtcgaatggcaaccaccttctttatcatgttatcaacctcaaagcatcttatctgcatca
atggacaaaaccatgatgatatggcaacctgaaagaacaactggtatttgggtgaatgtg
gttactgttggtgagttaagtcattctgctttagggttttatggtggacattggagtcca
aatggtgattctatattggcccatggttatggtggatctttccatttatggaaaaatgtt
ggtgatgatattgataattggaaaccccaaaaagttccatctggacattttgctgcagtg
atggatgttgtgtggggtaggggtggtgattatttgatgtcagtcagccatgatcagacc
tctagaatatttgcttcatggctaaatgaagcgaacacttggcatgaaattgctcgccct
caagttcatggtcatgatattaattgcttaacaatcattaaaggaaaagggaattataaa
tttgtaagtggagctgatgagaaagttgctagggtttttgaagctccattatcgttcttg
aaaacattaagtcatgcaacttcatgtctacatgattttgaagacttgcatgttgatgat
gttcaagcattaggggcaaatatgtccgctcttggtttatctcagaaacctatttatgct
caagcttcaagtgaaagaacaacggatggaattggaaatgaaggttttgacacaatggag
acaatcccggatgccattccatccgttttgactgaaccaccaattgaagagcaattagca
tggcatacgttatggccggaatcacataaactttatggtcatgggaatgaaatcttttct
ctttgttgtgatcatcaagggaagcttgttgcctcttcttgtaaggctcaatcggcttca
gtagcagaaatatggctatgggaagttggtagttggaaagcagttggaagattacagtct
cacaccttaacagtcactcggatggaattctcacatgatgacaaatatcttttagcagtc
tctagggatcgccacctgtcactcttctctatagatcgaacaggtggcatggatggaatc
agttataaacttgtaacaagacaagaagcacacaaaagaatcgtgtgggcatgttcatgg
aacccatccccattcacccaccaatttgccactggttccagggacaaaaccgtaaaaata
tgggaagtcaacaagtcttcttccaccatacaactactcataactctacctactttcaaa
accagtgtcacttccctatcttggactactcccaatcctgttgacaacaatggaattata
gcagttggaatggaatcaggtctcattgagctttggaatctgtgttttacaaaaaaccaa
aaggattcatctcttgtgatccagtttgatccgtttatgtgtcatgtttcatctgtgaat
cgtttggcatggagagatgtggagaagaaagatgattgtgagagtatggagttggcttct
tgtggagctgatcattgtgtcaggatttttaaggtaactttggtttaa

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