Lactuca sativa (garden lettuce): 111911258
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Entry
111911258 CDS
T05352
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111911258
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
111911258
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Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Nucleoporin_N
DUF6786
Motif
Other DBs
NCBI-GeneID:
111911258
NCBI-ProteinID:
XP_023762815
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Position
8:60310392..60314168
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AA seq
815 aa
AA seq
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MVQNAAVGVERVFIGGGCNRIVNNVSWGACGLVSFGSQNAVSIFSPQTAKILTTLPGHKA
SVNCTHWLPSNKFAFKAINWEKHYLLSGDAEGVIILWEFSLSENKWRNVSQLLQSHKKGV
TCITAILTSQTEAIFASTSSDCVLNIWKIVLPSFGGECTITCLDSLSTGLKPMVTLSLAE
LPGNPTHLILAMGGLDNKIHLYCSDSTQKFVRTCELKGHTDWIRSLDFSLPVETNNLLLV
SSSQDKGIRIWKLSLCNLDKKKAENSLAYYIKGPVFVSGSFSYQVSLESLLIGHEDWVYS
VEWQPPSLSCYQPQSILSASMDKTMMIWQPERTTGIWVNVVTVGELSHSALGFYGGHWSP
NGDSILAHGYGGSFHLWKNVGDDIDNWKPQKVPSGHFAAVMDVVWGRGGDYLMSVSHDQT
SRIFASWLNEANTWHEIARPQVHGHDINCLTIIKGKGNYKFVSGADEKVARVFEAPLSFL
KTLSHATSCLHDFEDLHVDDVQALGANMSALGLSQKPIYAQASSERTTDGIGNEGFDTME
TIPDAIPSVLTEPPIEEQLAWHTLWPESHKLYGHGNEIFSLCCDHQGKLVASSCKAQSAS
VAEIWLWEVGSWKAVGRLQSHTLTVTRMEFSHDDKYLLAVSRDRHLSLFSIDRTGGMDGI
SYKLVTRQEAHKRIVWACSWNPSPFTHQFATGSRDKTVKIWEVNKSSSTIQLLITLPTFK
TSVTSLSWTTPNPVDNNGIIAVGMESGLIELWNLCFTKNQKDSSLVIQFDPFMCHVSSVN
RLAWRDVEKKDDCESMELASCGADHCVRIFKVTLV
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaaatgcagcagtgggtgtggagagagtattcataggaggaggatgcaatcga
attgttaacaacgtttcctggggtgcctgtggtttagtttcattcggctctcaaaacgcc
gtctccattttttctcctcagactgcgaagatattaactacgctaccaggtcataaagct
tcagtcaactgtactcattggcttcccagcaacaaatttgcatttaaagctattaattgg
gagaaacattatctactctctggagatgctgaaggagtcatcattctgtgggagttctct
ctatcagaaaacaagtggagaaatgtatcacaactgctgcagtcacacaagaaaggcgtc
acgtgcattactgcaattctgacatctcaaactgaagcaatatttgcatccacctcttct
gattgtgtgcttaacatttggaaaatagtcttaccttcttttggaggtgaatgtacaatc
acgtgcttggattccctctctactggtttaaaaccaatggttacactttcactagcagaa
ctaccaggaaatcccacacaccttattctagcaatgggaggacttgacaacaagattcat
ttatattgcagtgattcaacacaaaaatttgttcgtacatgtgagttaaaagggcataca
gattggatcagaagcttagacttctcattacctgtagaaacaaacaatcttctccttgtt
agctcttctcaagataaaggcatacgcatatggaaattgtctttatgcaatttagacaaa
aagaaagcagaaaacagcttggcttattacataaaagggcctgtatttgtatcaggttct
ttctcctatcaagtgtctttagaatctcttctcattggtcatgaagattgggtatattca
gtcgaatggcaaccaccttctttatcatgttatcaacctcaaagcatcttatctgcatca
atggacaaaaccatgatgatatggcaacctgaaagaacaactggtatttgggtgaatgtg
gttactgttggtgagttaagtcattctgctttagggttttatggtggacattggagtcca
aatggtgattctatattggcccatggttatggtggatctttccatttatggaaaaatgtt
ggtgatgatattgataattggaaaccccaaaaagttccatctggacattttgctgcagtg
atggatgttgtgtggggtaggggtggtgattatttgatgtcagtcagccatgatcagacc
tctagaatatttgcttcatggctaaatgaagcgaacacttggcatgaaattgctcgccct
caagttcatggtcatgatattaattgcttaacaatcattaaaggaaaagggaattataaa
tttgtaagtggagctgatgagaaagttgctagggtttttgaagctccattatcgttcttg
aaaacattaagtcatgcaacttcatgtctacatgattttgaagacttgcatgttgatgat
gttcaagcattaggggcaaatatgtccgctcttggtttatctcagaaacctatttatgct
caagcttcaagtgaaagaacaacggatggaattggaaatgaaggttttgacacaatggag
acaatcccggatgccattccatccgttttgactgaaccaccaattgaagagcaattagca
tggcatacgttatggccggaatcacataaactttatggtcatgggaatgaaatcttttct
ctttgttgtgatcatcaagggaagcttgttgcctcttcttgtaaggctcaatcggcttca
gtagcagaaatatggctatgggaagttggtagttggaaagcagttggaagattacagtct
cacaccttaacagtcactcggatggaattctcacatgatgacaaatatcttttagcagtc
tctagggatcgccacctgtcactcttctctatagatcgaacaggtggcatggatggaatc
agttataaacttgtaacaagacaagaagcacacaaaagaatcgtgtgggcatgttcatgg
aacccatccccattcacccaccaatttgccactggttccagggacaaaaccgtaaaaata
tgggaagtcaacaagtcttcttccaccatacaactactcataactctacctactttcaaa
accagtgtcacttccctatcttggactactcccaatcctgttgacaacaatggaattata
gcagttggaatggaatcaggtctcattgagctttggaatctgtgttttacaaaaaaccaa
aaggattcatctcttgtgatccagtttgatccgtttatgtgtcatgtttcatctgtgaat
cgtttggcatggagagatgtggagaagaaagatgattgtgagagtatggagttggcttct
tgtggagctgatcattgtgtcaggatttttaaggtaactttggtttaa
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