KEGG   Lactuca sativa (garden lettuce): 111911272
Entry
111911272         CDS       T05352                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111911272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111911272
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111911272
SSDB
Motif
Pfam: TPR_MLP1_2 BRE1
Other DBs
NCBI-GeneID: 111911272
NCBI-ProteinID: XP_023762840
LinkDB
Position
8:complement(61472615..61480972)
AA seq 1999 aa
MPLFLSDEEYARCSHDPSLIAQKADAYIRELYNQLETEKAQYDASSITAEQTCSILEQKY
VSLKSEFTTLQSQHSQLNSTLEERVSELAQLQADKHQIYLQSIGKDGEIERLSLEASELQ
KSKSQLLQMIEHKDLEINEKNSSIKGYLDKIVSLTDNTSSKESRTRELEAELARAHTSLA
RLTQEKELVERHNVWLNDELTTKVNNLLELRKTHNELEADMSSKLAELERNYNDTRTSLK
WKDDRVKELESKLEALQEELCLSKDTAASTEERLSAELSTVNKLVELYKENSDEWSKKAG
ELEGVIKALETHANQVEKDYKEKLEKETSARKEFESEVSNLKAKLEKLEAELENSRNSDQ
FNLLQMTTFNPNSYKDSMENDNNLMIVPSIPAGISGTALAASLLRDGWSLVKMYEKYQEA
VDALRHEQLGRKQAESILKRVLHEIEEKAEVILDERAEHERMVEAYDMLNEKLQHSLSEQ
TLLERTLQELKAEIRRHERDYNLAQKENKDLQREVTVLLKECRDIQLRCSSVNYNSAIED
TSQLVDQDGDSVLSERLLTFKDINGLVEQNVQLRGLVRLLTEQIESKEMELKEQFEKEFQ
KHNKETASKVDAVLARAEEQAGMIESLHTSVAMYKKLYEEEHKRHLLPLESPDTTHMERR
SNVTLFLEGSNDASKRAQDRAYEKIKALEEELSVLRGEIITLKSQRDKSALEATFAHEKL
ERFMKDFEHQREETNGVLARNVEFSQLIIDYQRKIREASESLHTAEDLSRKLNMEVSVVK
REKEILINSEKRAFEEVRQLSERVHQLQATLNTVQTTEEVKEEARSAERMREGDYVKRTE
REWADAKKELQEERDNVRKLTLEHDSAMRTAMQRIEEMGKELANALHAVADANAKAAAAE
ERLLKFEKTKSSEANDENAPTQEDEMRVLKEEIEKLRVEAKTNKDHMLQYKSIAQVNEAA
LKQMEASHENFKVEAEKLKKSLEEEILSLKEEVNRLQEGYNLKAKEAASASVSQEEALVN
TLSEISKLRDECTAKNLCIESLESQVSAMKVDLEKEHQKWRISQDNYERQVILQSETIQE
LTKTSQALGSLQQEASELRKVSDILKIENEELKSKWETEKKVLEDSKDRAEKKYNEINEQ
NKILHDQLEALHIKGAEKSLGGAQSSDTFDDAGLQNVVKYLRRSKEIAETEISLLKQEKL
RLQSQLESALKSQETAQNLLRAERENSRSVHFTEEEFKALQLQVREMNLLRESNVQLREE
NKHNFEECIKLRQSTHNVRAEVENLESLLGERVNEVEACKREIEMLKKEKNELQIKVNEF
VEKFRDMDPEEYGRMCADLQDLKVKVLEKDGNLEEVKKAVLEKQEVIVKLEQEIGKSKVE
LDERESRLNSIGETETFLKGEVERLKKNYFLLRRRNDIVVKEKEELLKKNQELSKDLAAD
SSQVKKSNVDSSSVEQAAVTREREEKDTRIQMLEKTVEKLREESREREEKDKRIQMLEKV
IERLREDVRKGKDEVRMEKEKAKNQKSDKGIVDSSKLADDLEKHKQALKSLSEEIEKMNS
GDSIDELAAACLLAVENFEQVANQVSGEYGLPVTTTTTESPPADSCAPPQAVPPPQNTIE
ESAKPASSDKAKVEPRKIARRLVRPRIVKPDPAKSKGDVDMSDSVATNSQQSLSVRKRPS
EGQEGSQSNARETTGSDVAAPIVKKSRGSEPPPEAQNMTDAPESVIPEEAPPINVVDESQ
TLKEDMDTGREEEVETGEEQGVEDVQTESQNEIGEAEVSEDQPKEGEVAAGEVGSEPEEG
EMVSDAVVGNQETGEGQLVERGRRSASPMPVEDDMAGGEDTLGEMEIGSPLLTMEETEDK
NEEGEIEVEETTPESSMDNKVNNDANDEEAAVIDHVEKSTTTTSALTTETGGSTTEVKPE
ESAGTGTGTAETSNSTTINLNERARLRSLQRLAGTNTSPPPPAAARGRGRQAPRGRSVRG
GRAAGRGGAGQNPASQGGM
NT seq 6000 nt   +upstreamnt  +downstreamnt
atgccgttgttcttgtccgacgaagagtacgctcgctgctcccacgacccttctttgatt
gcgcagaaagccgacgcctatatcagagaactctacaatcaactcgagactgaaaaagct
caatacgatgcttcctccataaccgccgaacagacttgttcgattctcgagcaaaaatat
gtatctctgaaatctgaatttactacgcttcaatcgcaacactcgcagctcaattctact
cttgaagaacgcgtctctgagctcgctcagcttcaagcggataagcatcaaatctatctc
caatctattggcaaggatggtgagattgaaagactgtcattagaagcttcagagcttcaa
aaatccaaaagtcagttgctgcaaatgattgagcataaggatctagagattaatgagaag
aacagtagcatcaagggttatcttgacaagattgtttccttgactgacaatacttcctct
aaagaatcacgcaccagggaacttgaggctgagctggcacgtgctcacacttctttagct
cgattaactcaagagaaagaattagtcgaaaggcataatgtttggcttaatgatgagttg
accactaaagtcaacaatcttttggagctcagaaagacacataatgaactagaggcagac
atgtcttctaaacttgcagagttggagagaaactacaatgacacgcgtacttcattgaaa
tggaaagatgacagagtaaaggagctggaatcaaagctggaagctttacaagaagaatta
tgtttgtctaaggatacagctgcgagtactgaagaaagattgtctgctgagctgtcaact
gtaaacaagcttgttgaactttacaaggagaattcagatgaatggtctaaaaaggcagga
gagcttgaaggtgttatcaaagctttagagacacatgcaaatcaggttgaaaaggattac
aaagaaaaactcgaaaaggaaacatctgctagaaaagagtttgaaagtgaagtttcaaat
ttaaaagcaaaacttgagaagttagaagcagaattggaaaattccagaaactcagatcag
tttaatcttcttcaaatgaccactttcaacccgaattcatataaagactctatggagaat
gacaataatctaatgattgttcccagtattccagctggcatttcagggacagcattagct
gcttctcttcttcgtgatggttggagtttagtcaaaatgtatgagaaataccaagaagct
gttgatgctttgagacatgaacaattgggaagaaaacaggcggaatctatactaaaaaga
gtattgcatgaaatcgaagagaaagctgaggtcatattagatgaaagagctgaacacgaa
agaatggtggaagcatatgatatgttaaatgaaaaactacagcattctctttctgaacaa
actttacttgagagaacactacaggagctgaaagctgaaataagaagacatgaacgtgac
tacaatttagctcaaaaggagaacaaagaccttcagagagaggtgactgttttgctaaag
gaatgtcgtgacatacagcttcgttgtagttctgttaattacaattctgccattgaagac
acgagtcaactcgttgaccaagatggtgactctgttttgtctgagaggttgttgactttc
aaggatataaacggattagttgagcagaatgtacagcttcgggggctagttcgtctttta
actgaacagattgagagtaaagaaatggagttaaaggagcaattcgagaaggagttccaa
aaacataataaagaaacagcttctaaagttgatgcagttttagctagagcagaagaacaa
gcaggaatgattgagtcacttcatacttctgttgctatgtataaaaagctatatgaagaa
gaacataaacgccatcttttacccctggaatctccagatacaacacacatggagagaagg
agcaatgttactctctttttagaaggttctaacgatgcttcaaaaagagcacaagatcga
gcttatgagaaaattaaggctcttgaagaagagctctcagtgttaagaggcgagatcatt
acattgaaatcacaacgtgacaagtcagctttagaagcaacttttgcacatgagaaactc
gaaaggttcatgaaagattttgagcatcagagggaagaaacaaatggggttttagcaaga
aatgttgagttctcacagctgataatcgattaccaaagaaagattcgtgaagcttccgag
tctttgcacactgctgaagatttatcccgaaaactaaacatggaggtttctgttgtgaag
cgtgagaaagaaattttaatcaactctgaaaagagagcatttgaagaggttcgtcaactt
tctgagagagttcatcagctgcaggctactttgaatactgttcaaactactgaagaagtg
aaagaagaagcgagaagtgctgagcgtatgcgtgagggcgattatgtcaaacgtacagaa
agagaatgggcagatgctaaaaaggagcttcaagaagaacgtgataatgtccgaaagctc
acacttgaacatgattcagccatgagaacagctatgcaaagaattgaagaaatggggaaa
gaattggcaaacgcgttacatgctgttgcagatgctaatgctaaagcagctgctgcagag
gaacgattattgaaatttgagaaaacaaagagttctgaagcaaatgacgaaaacgcccct
acccaggaagacgagatgcgggttcttaaggaagagattgagaagttaagagttgaagca
aaaaccaacaaagatcacatgctgcagtataagagtatagcacaggtgaatgaggctgca
ttgaaacagatggaagcttcacatgagaatttcaaagttgaagctgaaaagttgaagaag
tcactagaagaagaaattttatcacttaaagaggaggtgaatcggcttcaagaagggtat
aatttgaaagcaaaagaagcagcttctgcttctgtttcacaggaagaagctcttgtgaac
acattgtcagagatttccaaattgagagatgaatgtactgctaaaaacctgtgtatcgag
tccttagaatcacaagtgtcagccatgaaagttgatttggagaaagagcatcaaaaatgg
cgtatttctcaagataattatgaacgccaggtcatacttcagtctgaaacaattcaggag
ttaacaaaaacatcacaagcattgggttccttacaacaagaagcatctgagctccgtaag
gtttcagacattctcaaaatcgaaaacgaagagctgaaaagcaagtgggagacagaaaag
aaggttctagaagattccaaagatagagccgaaaagaagtataatgaaatcaacgaacag
aacaagattttacacgatcagctcgaggccttacacattaagggagcagaaaagagtctt
ggtggtgctcagtcttctgatacatttgatgatgcgggattacagaatgtggtgaagtat
ttgaggcgttcgaaagagattgctgaaactgaaatctctttgttgaaacaggaaaagctt
cggttacaatcacagcttgaaagtgctttgaagtctcaagaaacagctcaaaatttgctt
cgtgctgagagggagaattctagatcagttcatttcacagaggaggagttcaaggcgttg
cagcttcaagttagagaaatgaatttgcttcgtgaaagtaacgtacagcttcgagaagaa
aacaaacataactttgaggaatgtatcaagttacgtcaatctactcataatgtgagggct
gaagttgaaaatttggaaagcttgcttggtgagagggtgaatgaggtggaggcttgtaag
agggagatagagatgcttaagaaggagaaaaacgagttgcagattaaagtgaatgagttt
gttgaaaaattcagagatatggatcctgaagaatatggtcggatgtgtgcggatttgcag
gatttgaaggtgaaagtgttggagaaagatggaaacttggaggaggttaagaaagctgtt
ttggagaaacaggaggtgatagtgaaattggaacaggagattggtaaaagtaaagtggaa
ttagatgaacgggaatcgaggttaaacagcataggtgaaaccgagacgtttttaaaagga
gaagttgagaggctgaagaaaaattattttctgttgagacgtagaaatgacattgttgtg
aaggagaaggaggaattattaaagaagaatcaagaactttctaaagatttagctgctgat
tcgagccaagtgaaaaagagtaatgtggatagcagttcagttgaacaagcagccgtgact
agggaaagagaagagaaagatacgagaattcagatgctggagaagactgttgagaagtta
agagaggagtcaagggagagagaagagaaagataaacggatacagatgttggagaaagtt
atcgaaaggcttagagaagacgtgaggaaaggaaaagacgaagttagaatggagaaagag
aaagcaaagaatcaaaagagtgacaagggaattgttgattcatcaaagctggcagatgac
ttggagaaacataaacaggcgttaaagagcctttcggaggaaatcgaaaagatgaattcc
ggcgactccattgatgaacttgctgcagcttgtcttcttgctgttgaaaacttcgaacaa
gtcgccaatcaagtttccggcgagtatggacttccggtcaccaccaccaccaccgagtca
ccgccagccgactcctgtgcaccaccgcaagctgtccctccacctcaaaacacaatagaa
gaaagtgcaaaaccagcatcaagcgataaagcaaaagtggaaccacgtaaaattgcacga
aggctagttcggcctcgtatcgtaaagcctgatccagcgaagtcaaagggcgatgttgac
atgtcagattctgttgcaaccaactcacaacagtccttgtctgtacgcaaacgtccttca
gagggacaagaaggatcacaatcaaatgcgcgtgagaccaccggttccgatgtggcagcg
ccaattgtcaagaaatccagaggctcagaaccaccacccgaggctcaaaacatgacagat
gctcccgaaagtgtaatacccgaagaggctcctccgatcaatgttgtagacgaaagtcag
actttaaaagaagatatggatacaggaagggaagaggaggttgagactggtgaagaacag
ggggttgaagatgttcaaacggaatcacagaatgaaattggtgaggcggaagtttctgag
gatcaaccgaaggagggtgaggtggcagcaggtgaagtgggaagtgagcctgaagaaggt
gaaatggtgtcggatgctgttgtcggtaaccaagaaaccggggaaggtcagttggttgag
cgtgggaggaggtcggcttcacctatgccggttgaagatgacatggcaggaggagaggat
acgctcggggagatggagattggttctccgttgttgacaatggaggagactgaagataaa
aatgaagaaggtgaaatagaagtggaggaaactacacccgagagctcaatggataataag
gtgaataacgatgcgaatgatgaagaggctgctgttattgatcatgttgagaaatcaaca
acaacaacttctgctttgactactgaaactggagggtcaacaacagaagtgaaaccagaa
gagtcagctggtactggtactggtactgctgagacaagtaattcgacaacaattaatttg
aatgagagagcaaggctgaggtctttacagagactggccggaacaaatacttcacctcct
cctcctgctgccgccaggggtcgtggacggcaggccccacgtggacgaagtgttcgtggt
ggacgtgctgctggccgtggtggtgctggtcaaaaccctgcttctcaaggaggaatgtga

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