Lactuca sativa (garden lettuce): 111911309
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Entry
111911309 CDS
T05352
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111911309
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111911309
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GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
DUF371
Motif
Other DBs
NCBI-GeneID:
111911309
NCBI-ProteinID:
XP_023762872
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All DBs
Position
4:complement(394558741..394565127)
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AA seq
573 aa
AA seq
DB search
MAGQRSSHGKRSHSQSDYSDHGRSKRHNNSDDRGGQNSIGSDDTVYRYLCPSKRIGSIMG
RGGDIIKQLRSESKSKIRIGETVSGCDERVVTIHSTSDETNDFDDPDERVCPAMDALFKV
YDRVVADDLADDMDPEETPQVTVRLLVPSDQIGCVIGKGGQIVQTIRTDTGAQIRIMKDN
HLPACALSSDELVQISGEASIVRKALFQIATRLHDNPSRSQHLLSSSTPNANNAYHSGGS
LMGGTPGGAPIMGLAPLMGAYGGYKGESGGEWARGFYPGPREDSSPREFHLRLICPTGNI
GGVIGKGGAIINQIRQETGAAIKVDNSATEADDCIISISAKEAFEDAFSPAIEAALRLQP
RCSERVERDSGLISFTTRLLVPTSRIGCLIGKGGAIITEIRRITKANIRILSKENLPKVA
DRDDEMVQISADLDLAKDALLQVTSRLRANLFEREGALSTFVPVLPYLPVAPDVADVGKY
ESRDSSKGHHGRGHSYSSGGYNNNSNNNNNNHNNASTDLPPGDAYGSYGGSLQGRSGGDS
YGAYGSYSSGRSGSSGLSRRDNNPSSRRRDYGY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcaaagaagtagtcatggaaaacgttcacattctcaatctgattacagtgat
catggaagaagcaagaggcataacaacagtgatgatagaggaggacaaaattctattggc
tcagatgacactgtgtatcgctacttatgtcctagtaagcgaatcggaagcataatggga
agaggtggtgatataatcaagcaattaagatccgaaagcaagtcaaaaatcagaattgga
gaaacagtttcagggtgtgatgaacgtgtggtgactatccatagcacgagtgatgaaaca
aatgattttgatgatcctgatgaacgagtgtgtccagcaatggatgctcttttcaaagtc
tatgatagagttgttgctgatgacctggcagatgacatggatcctgaagaaacaccacaa
gttacagttcgccttcttgtcccttcagatcaaattggatgtgttattggaaaaggtgga
cagattgttcaaactatacgaactgatactggtgctcagattcggatcatgaaagataat
cacctgcctgcttgtgcattaagcagtgatgaacttgtgcagatatcaggtgaagcatct
atagtaagaaaagcactcttccaaatagcaacacgcctccatgacaacccatcaagatct
caacacctgctatcttcttccacacctaatgctaataatgcataccattctggtgggtcc
ctcatggggggtacacctgggggggcaccaatcatgggtttggccccacttatgggtgca
tatggtggttacaagggtgaaagtggtggtgaatgggcacgtgggttttacccgggccca
cgtgaggattcttctccaagggaatttcatcttcgtttgatttgcccaactggaaacatt
ggtggtgtcataggaaaaggtggtgctataattaatcaaattagacaggaaactggtgca
gctattaaagttgataattcagctactgaagcagatgattgcataatatctatttcagcc
aaagaggcatttgaagatgcgttttctccagctatagaagctgcattacgtttgcaacca
aggtgtagtgagagagtagagagagattcaggtctaatttcattcaccactcgattactt
gtcccaacttctcgaatcggatgccttattggaaaaggaggagcaataatcacagaaata
agaagaattacaaaagcaaatattcgaatactttccaaagagaatctcccaaaagttgca
gaccgtgatgatgagatggtacagatttctgcagatcttgatcttgcaaaggacgcactg
ttacaagtgacatcaaggttaagggcaaatctatttgaaagagaaggggcattatcgaca
tttgtcccagttcttccatatcttcctgtagcacctgatgtggctgatgttggaaagtat
gaaagtagagattcttcaaaaggacatcatggaagaggacattcttattcttctggtgga
tataataataatagtaataataataataataatcataataatgcatctactgatttgcca
cctggcgatgcatatggaagctatggtggtagcttacagggacgaagtggtggtgattcg
tatggagcgtatggtagctattcttcaggtcgcagtggtagttctgggttatcaaggcga
gataataaccctagttctaggcggagggattatggttattga
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