Lactuca sativa (garden lettuce): 111911426
Help
Entry
111911426 CDS
T05352
Name
(RefSeq) LOW QUALITY PROTEIN: axial regulator YABBY 5
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111911426
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
111911426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
Ccdc124
HMG_box
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
111911426
NCBI-ProteinID:
XP_052627472
LinkDB
All DBs
Position
5:233487549..233492017
Genome browser
AA seq
210 aa
AA seq
DB search
MSSSSCIDVAAASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMGMAA
AFHQSFSNSNSSSQDCTSHHQHGQAPNHTPPNYRVDXGSASKYNNRMPMRPSPTSITNDP
KINRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLE
ANNHQAKLDELSCVQGSEKRLRSRTALFKK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagcagctgcatagatgtagcagcagcatctgaacaactgtgttatatccct
tgtaacttttgcaatattgttcttgcggtaagtgtaccatgcagcagcttgtttgacata
gtgacagtaagatgtggacactgcaccaatctgtggtctgtgaatatgggcatggctgct
gcctttcaccagtctttctcaaattccaattcctcctcccaagattgtacttctcatcat
caacatggccaggctccgaaccacacacctccaaattatagggtggatntgggttctgct
tcaaagtacaacaacaggatgccaatgaggccatctccgacttccattactaatgaccca
aagatcaatcgccctccggagaagaggcagcgtgttccttctgcttataaccagttcata
aaggaggagatccaaaggatcaaggcaaataatccagatatcagccatagggaagccttt
agtactgctgcaaaaaattgggcacatttccctcacattcattttgggttgatgttggaa
gccaataatcaccaagcaaaacttgacgagctgagttgtgtccaaggatctgagaagcga
ctaagatccaggactgcattgtttaagaaatga
DBGET
integrated database retrieval system
