Lactuca sativa (garden lettuce): 111911911
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Entry
111911911 CDS
T05352
Name
(RefSeq) peroxisome biogenesis protein 1
KO
K13338
peroxin-1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111911911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111911911
Membrane trafficking [BR:
lsv04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
111911911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
NPHP3_N
AAA_5
AAA_22
RuvB_N
NACHT
IstB_IS21
RNA_helicase
AAA_14
nSTAND3
Bac_DnaA
Mg_chelatase
ATPase_2
AAA_19
AAA_7
NB-ARC
AAA_24
AAA_11
AAA_lid_PRS2_C
TIP49
KAP_NTPase
SLFN-g3_helicase
PhoH
KTI12
Sigma54_activat
Zeta_toxin
GvpD_P-loop
Motif
Other DBs
NCBI-GeneID:
111911911
NCBI-ProteinID:
XP_023763435
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Position
1:9576730..9583229
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AA seq
1111 aa
AA seq
DB search
MEMEVRAVAGLEGCYVSLPLHLIQTLQSTSSSGSLFSFLALELRSIANNNDVWYVAWSGS
ASSSSSAIEIAQQFAECLHLPDHTTVRVRAIPSLPKARSVTIEPDTEDDWEVLELNAEHA
EAAILKQAGIVHEGMRFPLWLHGHTTITFSVVSTDPEEPMVQLVPGTEVCVAPKRRRKSE
NSVVKALLRIQDGDSRFFHKLRVKDTEMGVVLTSAVFIHPETAKVSSLDSLQTIVLEQRL
VKKEKKLNSTAKEVDNVIPTDKLDARQAVVRLIISDSVAKGHVMLSQSLRFYLRAGLHSW
VHVRSCNIVLQKDPLSFVISPCQFKMFGKKVSESNGFGNLHGHRNHHTEKMFLKTNPDTQ
HDLSDWSTHEKVIAALSDDTSGHQNEGTSVSPTSNKGLLVLLHAWILSQLDAIMSFSKTE
LNSMVLGNKMLLHFQVKGNDLQKLHESHNGFFEVKKKTGESSVDIMYVLSVSEDSIQGGT
AYELEFSEGNKKTMNKKSLDFFLQKLEKGDGLPLHTVKERISNKRSTLDISSLSWMGTTA
ADVTNRLMVLLSPSSGIFLSTYNLPFPGHVLIYGPPGSGKTLLATTVAKTIEEHEDVLAH
IVYVGCSKLASSKSQAIHQALSSYISEALDHAPSLVVLDDLDSIIASPNASEDNHSSPSS
TLLMEFLIGILDEYEVKRKHSCGIGPIAFIACVQTLTSIPQTLSSSGRFDFHVQLAAPAA
AERGALLKYEIQKRCLSCSDDVLLDIASSCDGYDAYDLEILVDRSVHAAIGRFVSRGLTF
GSEKNPNLTKDDFLQAMKGFLPIAMRDITKSASEEGHGGWQDVGGLIEIRNSIKEMIELP
SKFPMIFSQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASE
QAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFV
FAATSRPDLLDAALLRPGRLDRLLFCDFPSPQERLDILKVLSKKLPMANDVKLEGIARKT
QGFSGADLQALLSDAQLAAVHDLLNSEDAHKPGNKPVITNALLNSIASSARPSVSETEKH
RLYDIYGQFLDAKRSASAQSRDAKGKRATLA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagtaagagcagttgcaggattggaaggatgttacgtttcactaccactt
catctgattcaaactcttcaatcaacttcttcttctggttctctgttttcatttctagct
ctcgagcttcgttcaatcgcaaacaataatgatgtctggtacgttgcttggtctggttcg
gcatcctctagttcttctgccatcgagattgctcagcaatttgcagaatgccttcatcta
ccagatcatacaactgttcgagtgagagcaattcctagtcttcccaaagccagaagtgtg
actattgaacctgatacagaggatgattgggaagttctagagctaaatgcagagcatgca
gaggcagccatcttgaagcaggctggaatagtccatgaaggcatgagatttcctttgtgg
ttgcatgggcacacaaccattacattttctgtagtctcaactgatccagaggaaccaatg
gtgcaacttgtgccagggactgaagtatgtgttgctccaaagagacgcagaaaatctgaa
aactcagttgtaaaggcattactgcgtatccaagatggtgacagtagattttttcataaa
cttcgggtgaaggatactgagatgggggtggttcttacttctgctgtctttattcatcca
gaaacagctaaagtttcttcccttgattctcttcaaactatagtgttagagcaaaggtta
gttaagaaggagaagaaactaaattcaactgcaaaggaagttgacaatgtgattccaact
gacaagctggatgccagacaggctgttgttcgtcttataatatcagattcagtggctaaa
ggacatgtcatgctttctcaatctttacgattttatctgagagcaggcttacattcttgg
gtacatgtgagaagttgcaatatcgttctacaaaaagatcctctgtcatttgttatttct
ccttgtcaatttaagatgtttggaaagaaagtctctgaaagtaatggttttggaaatctt
catggacacaggaatcatcacacagagaaaatgtttctgaagacaaatccagatacccaa
catgacttgtctgattggtcaacccatgagaaggttattgcagccctttcagatgataca
tctggtcatcagaatgaaggaacttctgttagccccacaagtaataaagggttattggtt
cttctgcatgcatggattttgtctcaacttgatgccattatgtctttttccaaaactgaa
ctaaattcaatggttttggggaataagatgttgcttcactttcaggtgaaaggcaatgat
ttacaaaaactacatgaatcacataatggtttttttgaagtaaaaaagaaaactggggaa
tcatcagttgatatcatgtatgttctctcggtttctgaagattctatccaaggtggaaca
gcttatgagcttgagttttctgaaggaaacaagaagaccatgaataagaaaagcttagat
ttctttcttcagaaattggaaaagggtgatggtttacctcttcatacagtcaaagaaaga
atatctaacaagcgatctaccttggacatttcttccttgagctggatgggcacaacagct
gctgatgtgactaataggttaatggtgttactgtcaccttcctctgggatattcttaagt
acttacaatcttcctttccctggacatgtgttgatttatggacctccaggttctgggaag
acattattagccacaactgttgcaaaaactattgaagaacatgaagatgtcttggcacac
atagtgtatgtaggttgttctaaacttgcttcgagtaagtcccaagctatccatcaagcc
ctatccagttacatatctgaagccttggatcatgctccttcccttgtggtacttgatgat
cttgatagcattatagcatcacccaatgcctcagaagacaatcactcttcaccttcttct
actttgctcatggaatttctcataggcatcttggatgaatatgaggtaaagaggaagcat
tcatgtggaattggtcccattgcattcatagcttgtgttcagaccctaaccagtattcca
caaaccttaagttcctctggcaggtttgactttcatgtccaactggctgctcctgcagct
gctgaacgtggggctttacttaaatatgagattcaaaaacgttgtttgtcctgttctgat
gatgttttgttggatatagcttcctcatgtgatggatatgatgcgtatgatctggaaatc
ctggtggataggtcagttcatgctgcaattggtcggtttgtgtctcgtgggttgactttt
gggagcgagaaaaaccctaatttgactaaggatgattttttgcaagcgatgaaaggattt
ctgcctattgctatgcgtgatattactaaatctgcttctgaagaaggacatggaggctgg
caggatgttggtggtctaattgaaattcgcaattctatcaaagagatgattgaattacct
tcaaagtttccaatgatcttttcacaagctcctttacggttgaggtctaatgttctgtta
tatgggcccccgggttgtggtaaaacacatattgttggtgctgctgctgctgcatgttca
ctacgcttcatctctgtcaaaggtcccgagctcttgaataaatacattggtgcttctgag
caagccgtacgtgatatattttcaaaagcagcagctgcagcaccatgcctcctctttttt
gatgaatttgactccattgctccaaaaaggggtcacgataacactggtgtgaccgatcga
gttgttaatcaatttctaacagagttagatggtgttgaggtgctgactggagtatttgtt
tttgctgccaccagtagacctgatctactggatgctgccctgctgcgacctggaagatta
gatcgtctgcttttctgtgatttcccatcaccacaagagagattggatattcttaaagtt
ctttctaaaaagttaccgatggcgaatgacgtgaagttggaaggcatagcacgaaaaaca
caaggatttagtggagcagatctccaagctctgttatcagatgcacagctggcagctgtt
catgatcttctcaacagtgaagacgctcacaagcctggaaataaaccggtgatcaccaat
gcactcttgaactcgattgcctccagtgcaagaccttcagtttcagaaacagaaaaacac
agattatacgacatttatggccagttcttggatgctaaacgatctgcttctgcacagtcg
agagatgccaaagggaaaagagcaacacttgcataa
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