Lactuca sativa (garden lettuce): 111912236
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Entry
111912236 CDS
T05352
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111912236
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111912236
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111912236
NCBI-ProteinID:
XP_023763726
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Position
2:212583863..212587252
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AA seq
331 aa
AA seq
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MATTLPYADVDSSLKGMAGRAEGFGRSAVGGAHGPVHRVTSLADDGPGSLREACRMKEPL
WIIFEISGTIDLSSYLNVSSHKTIDGRGQRIKLTGKGLRLKECENIIICNLEFEGGRGHD
VDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAKHDKTMLIGADPSHV
DDRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRNWGVYAICASVEAQIYSQCNIYE
AGEKKKAFEFYTEKAADKEEGRSGLIVSEGDLVLNGAQSCPVKEANGEKMFHPSEFYPKW
TMEPATDALKQTLQVCTGWQSVAKPAEQGTS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacgttaccatacgccgatgttgattcaagcttgaaaggaatggccggtcgg
gccgagggttttggccgttctgcagtcggtggcgctcatggtcctgtgcatcgcgtcacc
tccttggctgatgatgggccaggatcacttcgggaagcatgtcgcatgaaagaaccattg
tggataatctttgaaatttcaggaactattgatctgtcatcctacttgaatgtctcatca
cataaaaccattgatggtcgtgggcagcgtataaaactaacaggaaaaggtttgagacta
aaggaatgtgaaaatattataatatgcaatctggaatttgaaggtggtagaggacatgat
gttgatggtatacaaattaaaccaaattcaaagcacatttggattgatcgatgcagcctg
cgtgactatgatgatggacttatagatataaccagacaaagcacagacattacagtttcc
agatgttactttgctaaacatgataagacaatgcttattggagcggatccatctcatgtt
gatgatagatgtatcagagtcacaattcatcattgtttttttgatgggacacgacaaaga
catcctcgtcttcgatttgggaaagttcatctttacaacaattacactagaaattgggga
gtgtatgctatttgtgctagtgtagaagcacagatatattctcaatgcaacatctatgaa
gcaggagagaagaaaaaagcattcgaattttataccgaaaaggcagcagataaggaggaa
ggtagatcagggttgatagtttcagaaggggacttggttttaaatggagctcaatcatgt
ccagtgaaagaagcaaatggggaaaagatgtttcatccaagtgagttttatccaaaatgg
acaatggaacctgctacagatgcactgaaacagactctccaggtctgtactggttggcaa
tctgttgcaaaaccagctgagcaaggcacttcctga
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