Lactuca sativa (garden lettuce): 111912248
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Entry
111912248 CDS
T05352
Name
(RefSeq) ABC transporter B family member 6
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111912248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111912248
04147 Exosome [BR:
lsv04147
]
111912248
04090 CD molecules [BR:
lsv04090
]
111912248
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111912248
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111912248
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111912248
CD molecules [BR:
lsv04090
]
Proteins
111912248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_15
AAA_29
AAA_21
AAA_22
RsgA_GTPase
AAA_23
AAA_16
DUF87
Motif
Other DBs
NCBI-GeneID:
111912248
NCBI-ProteinID:
XP_023763738
LinkDB
All DBs
Position
2:212793506..212800278
Genome browser
AA seq
1396 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYMDISNDALPVEAEEEMEESEEIEPPP
AAVPFSKLFVCADRLDWVLMVVGSIAAAAHGTALVVYLHYFAKIVQLLGHGEENPDLLFD
RFKELALTLVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNN
GDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIGFLNCWQIAGLTLLTGPFIVAA
GGISNIFLHRLAENIQDAYAEAASVAEQAVSYVRTLYAFTNETLAKYSYAASLQATLRYG
ILISLVQGLGLGFTYGLAICSCALQLYVGRFLVTHRHAHGGEIVTALFAIILSGLGLNQA
ATNFYSFEQGRIAAYRLFEMISRSSSSVDHDGNTLSSVQGNIEFRNVYFSYLSRPEIPIL
SGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI
GLVTQEPALLSLSIRDNIAYGRDATTLQIEDAAKIAHAHTFITSLEKGYDTQVGRAGLSL
TEEQKIRLSVARAVLSNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLCL
IRNSDFIAVMEDGQLMEVGTHDELIASDGLYAELLRCEEAAKLPRRMPVRTYNETQAFQI
EKDSTDNYQESSSPKFAKSPSLQRASNLHGTRPDSAYGSHESPRNPSPAEKENGLSMDGT
NKEPSIKRQDSFEKRLPELPKIDVHAIRRQPSNGSNPESPISPLLTSDPQSERSHSQTFS
RPNNALEKPIRVQQAVKEKQKKKEPSIWRLVELSLAEWLYAVLGSTGAAIFGSFNPLLAY
VIALIVTAYYRNENDRRHKIHDEVDKWCLIIACMGVVTVIANFLQHFYFGIMGEKMTERV
RRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSILIQDSAAVMVAIL
IGMLLHWRLALVALATLPVLTLSAIAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYTVV
AFCAGNKVMELYRLQLRKIFYQSFFHGMAIGFAFGFSQFLLFACNALLLWYTAICVKNNY
MDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDTSALKP
PNVYGSIELKSVDFSYPTRPEILVLSNFSLKVTGGQTVAVVGVSGSGKSTIISLIERFYD
PVAGQIMLDGRDLKQFNVRWLRNHLGVVQQEPIIFSTTIRENIIYARHNASEAEIKEAAR
IANAHHFISNQPHGYDTHVGMRGVDLTPGQKQRIAIARVILKNAPILLLDEASSSIESES
SRVVQEALDTLVMGNKTTILIAHRAVMMKHVDNIVVLNGGRIVEEGSHDSLMGKNGLYVR
LMQPHFGKGIRQHRLV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcgagagggttgtttgggtggtccccaccacacatacagcctttaacgccg
gtatcggaggtctcagagccgccagagtcaccgtcgccttacatggacataagtaacgat
gctttacctgttgaagctgaagaggaaatggaggagtcagaggagatcgagccgcctcca
gctgctgtaccgttctccaagctgtttgtgtgtgctgataggttagattgggtgcttatg
gtggttggatcgattgctgcggcggcgcatgggacagcactggttgtttacttgcattac
tttgccaaaattgttcagttgttaggtcacggcgaggagaacccggatttgctttttgat
aggttcaaagagcttgccctcacccttgtttatattgctggtggtgtttttgctgctggt
tggatagaggtttcatgttggattcttacgggagaaaggcagacagctgttatcaggtca
agatacgtgcaagtactacttaatcaagatatgagtttctttgatacttatggaaacaat
ggagacattgtgagccaagtgttaagtgatgtattacttatccaatctgcccttagtgaa
aaagttggaaattacattcataacatggctacattcttcagtggccttgcaattggattc
ctcaactgttggcaaattgcaggcctcactttattaactggaccctttattgtggctgca
ggaggaatatcaaatatatttctccatagacttgctgagaatattcaagatgcatatgct
gaagcagcaagtgttgctgaacaggctgtttcatatgttaggacattgtatgcttttaca
aacgaaaccttagcaaaatattcctatgcagcttcactacaagctactttaagatatggt
atattgattagtcttgtacaaggacttggacttggcttcacatatgggcttgcaatttgc
tcttgtgctttgcaactttatgttggaaggtttttggttacacatagacatgctcatggt
ggagaaattgtaactgctctctttgctatcattttaagtggccttgggctgaatcaagct
gcaaccaatttctattcatttgagcaaggaagaatcgctgcatatcggctttttgaaatg
attagccgatcatcttcttctgttgatcatgatggaaacactctttcttctgttcaaggg
aatatcgaattccggaatgtgtatttcagttacttgtcgcgtcccgaaattcctatctta
agtggattttacctaactgtccctgccaaaaaaacagtggcacttgtgggaagaaatggg
tctggtaaaagtagtattatacccctcatggaacggttctatgatcctactttaggtgaa
gttcttttggatggtgagaatatcaagaatctgaaattggaatggctaagaagtcaaatt
ggcttagtcactcaagaacctgctttgttaagcttgagtataagagacaatattgcttat
ggtagagatgccacaacacttcaaatagaagatgctgctaaaatcgcgcatgcacatacg
tttatcacctcactagagaaaggatacgacacacaggtaggtagggctggtttatcatta
acagaagaacagaaaataagactttctgttgcaagggcagttctttcaaatccttctatt
cttcttcttgatgaagtcactggtggacttgactttgaagctgaaagatctgttcaagag
gctcttgatcttcttatgttaggccgatcaaccatcatcattgctcgtagactttgtcta
ataagaaactctgacttcatagctgtaatggaagatggtcagttaatggaggtcgggacc
cacgatgaactaatcgcctcagatgggttatatgcagagcttctaagatgtgaagaagca
gctaaactcccaagaaggatgccagtgagaacatacaatgagactcaagcattccaaatc
gaaaaagattctacagataactatcaagaatcatcatctccaaaatttgcaaaatcgcca
tcacttcaacgagcttcaaacttacacggaacaagacccgattcagcttacgggtcacat
gaatcaccaagaaacccgagccctgcagaaaaagaaaacggattatccatggatggaaca
aacaaagaaccatcaatcaaaagacaagacagttttgaaaaaagattacccgaattacca
aaaatcgatgttcacgctatccgtagacaaccatcaaacgggtcaaacccggaatccccc
atttcaccattgttgacctctgacccgcaaagtgaacgctcacattcacaaaccttcagt
cgacctaataatgctcttgaaaagccaattagagtacaacaagcagtaaaagaaaaacaa
aaaaagaaagaaccatcaatttggagacttgtggaattaagtttggctgaatggctttat
gctgttttaggaagcacgggtgctgctatattcggttctttcaaccctcttctcgcttat
gtcattgcactaattgttacagcttattatcgtaacgaaaacgacagaagacacaaaata
cacgatgaagttgacaagtggtgcttaatcattgcctgcatgggtgttgtcactgtaatc
gcaaacttcttacaacacttttacttcggtatcatgggggagaaaatgactgaacgagtt
aggagaatgatgttttctgcaatgcttcgaaatgaagttggatggtttgatgaagaagag
aacagtgcagacacgttgtccatgcgattagcaaacgatgcaacatttgtgagagcagct
tttagcaaccgactttctatactcatacaagatagtgcagctgttatggttgcaatatta
atcggaatgcttctccattggcgattagcacttgtagcattagccacattgcctgttctt
accctatccgccattgctcagaaactatggttagcgggattttcaaaggggatacaggag
atgcacaggaaagcgtcattggttcttgaagatgctgtcagaaatatatacactgtggta
gcattctgtgctggcaacaaagttatggagctttacagattacaactacgcaagatattc
tatcagagcttctttcatggcatggccatcggttttgcttttgggttttctcagtttctt
cttttcgcatgcaatgcccttcttctctggtacactgcaatctgtgtgaagaacaattac
atggatctcccaaccgctctcaaagagtacatggttttctcttttgccacttttgccctt
gtggagcctttcggcttggctccttacattctcaaaagaagaaagtctttgatatccgta
tttgaaatcatcgatagagtacccaaaattgatcccgacgatacttcagctttgaaacca
ccaaatgtatacggatccatcgagttgaaaagcgttgacttttcctacccgacccgcccg
gagattctcgtactgagtaacttcagtctgaaggtgaccggcgggcagacggtggcggtg
gttggcgtttcgggatccggaaaaagcacgataatttcactgatcgagagattttacgac
ccggttgccggacagattatgctggatggacgcgatttgaaacagtttaatgtaagatgg
ttgagaaaccaccttggtgtagtccaacaagaaccgatcattttctcaacaacaattcgt
gaaaatataatatacgcgagacacaacgcgagtgaagccgaaatcaaagaagctgcaaga
atagcaaacgcgcaccatttcatcagcaaccagccacacgggtacgacacacatgttggg
atgaggggcgtggatctaaccccgggccagaagcagagaatcgcgatcgcccgggttatt
ttaaagaatgcaccgattttgttactggacgaggcgagctcgtcaattgaatcggaatcg
agtcgtgtggttcaggaggctcttgatactttagtcatggggaacaaaaccactattttg
atagctcatagagctgttatgatgaaacatgtggacaacattgtggttcttaatggtggt
aggattgttgaggaagggtcccacgactctttaatggggaaaaatggtttgtatgttcgg
ttaatgcaaccgcattttggaaaggggattcgtcagcatagacttgtgtag
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integrated database retrieval system
