Lactuca sativa (garden lettuce): 111912513
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Entry
111912513 CDS
T05352
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111912513
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111912513
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111912513
Protein phosphatases and associated proteins [BR:
lsv01009
]
HAD phosphatases
Fcp/Scp phosphatases
111912513
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111912513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
111912513
NCBI-ProteinID:
XP_023764010
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All DBs
Position
9:complement(138579996..138585416)
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AA seq
595 aa
AA seq
DB search
MSNISSSSSPVAMKDVVHKLQLCLLEGIKSETQLFVAGSLLSKSDYHDVVTERSIAQMCG
YPLCPNSLPSPGEAAVKGRYHISLKEHKVYDLLEMRMYCSTKCVVDSRAYAESLQDERSL
VIDTAKLNRVVRLFDGLSVKAEEGLGDSGDFGLRNLSIKEKEDGGVGGGIVSLEEWIGPS
NAIEGYIPQHERSSKNKPGRPKREEESIFGEMDFMSTIITQDDGYSISKGKGAETKTSSN
SRKKMSHNNNKDKMKTSSSSSSSSSCNVQKKKVTTSNDEESENGNKAKIGSSEPSCSVGG
LKSSLKSSSRTNRSVSWADDQTLCEYSGNDPDPEHTFRVASAEACAAALSQAAEAVASGE
SDAPDAVSEAGIVILPPPGDGAEAEAEPTRLKWPKKTGITESDVFDSFEDSWFDAPPEEF
VLDLSPFARMFMSLFAWVSSSTLAYVYGGDDSCYAWVNGREYPRIVVLADGRSAEIKTTL
AGCLSRALPGLVRHLRLPTPVSTIESMMGCLLDTMSFIDALPPLRMKQWQVFVLLFVDAL
SVSRIPAMTPHLANKRRFFQKVFDDAQISSEEYELLKDLIIPLGRAPQLATQSGG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatatcatcatcctcatcaccggtagctatgaaagacgtggtacacaagcta
caactatgtctgttagaaggtatcaaatctgaaacccagttattcgtagctggatctttg
ctctctaagtcggattatcacgacgttgtgaccgaaagatcaattgctcaaatgtgtggt
tacccgctttgccccaactcattaccctctccgggagaagctgcagttaagggcagatat
catatttctctgaaagagcacaaagtttacgaccttttagaaatgcgtatgtactgttcg
acaaaatgcgtagttgacagccgggcatatgctgaaagtttgcaggatgaacggtccttg
gttattgatacagcgaaactcaatagggtggttaggctgtttgacggtttgagcgtgaag
gctgaagagggtttgggggacagtggtgattttggattgcgtaacttgtcaattaaggag
aaggaagatggaggtgttggtggcggaatcgtgtctttggaggaatggattggcccttca
aatgcaatcgagggttatattccacaacatgaacgcagttcaaaaaataaaccggggagg
ccaaaaagggaagaagagagcatctttggcgagatggatttcatgagtaccataattact
caagatgatggatatagcatatctaaaggaaaaggagctgaaacaaaaactagtagtaat
agtagaaagaaaatgagccataataataataaagataagatgaaaacatcatcatcatca
tcatcatcatcgtcatgtaatgtgcaaaagaaaaaggttactacatcaaatgatgaagag
agtgaaaatggtaacaaggcaaagattggttcctctgagccaagttgtagtgttgggggg
cttaaatcatctctgaaatcctcaagtaggacaaataggtctgtgagttgggctgatgat
caaacactgtgtgaatacagtggaaatgatcctgatcctgagcatacattccgagttgca
tcagcagaagcctgtgctgcagcactgagccaagctgcagaagccgttgcttccggggaa
tctgatgctcctgatgctgtttctgaagctggaattgtaatcctgccacctcctggtgat
ggtgcagaagcagaagcagaaccaacccgattgaaatggcccaaaaaaaccggtatcaca
gagtccgacgtcttcgattcctttgaggattcttggtttgatgctccaccagaggaattt
gtcctagatctatcaccatttgcaagaatgttcatgtctttgtttgcatgggtttcctca
tctactttggcgtatgtatatggaggtgatgatagttgttatgcatgggttaatgggcgg
gagtatccgcggatagttgtattggcagatggccggtctgctgaaattaagacaactctc
gcaggctgtctttctcgagctttgcctggacttgttcgtcatctcagacttcccactccc
gtttctactattgaatccatgatgggttgtttactggacaccatgtcttttattgatgca
cttccacctctcagaatgaaacaatggcaggtgtttgttcttttgtttgttgatgctctt
tctgtctcccggattcctgccatgaccccacacttggcaaataaaagaaggttctttcaa
aaggtgtttgatgatgctcagataagtagcgaggaatatgagttgttaaaggatttgatc
attccgctaggacgagcccctcaattggctacacaaagtggaggctaa
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