Lactuca sativa (garden lettuce): 111912757
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Entry
111912757 CDS
T05352
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00900
Terpenoid backbone biosynthesis
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Module
lsv_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
111912757
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lsv01006
]
111912757
Enzymes [BR:
lsv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
111912757
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
111912757
2.5.1.29 geranylgeranyl diphosphate synthase
111912757
Prenyltransferases [BR:
lsv01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
111912757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
111912757
NCBI-ProteinID:
XP_023764267
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All DBs
Position
9:167348095..167349258
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AA seq
287 aa
AA seq
DB search
MAGARLSLTGTNLSRPFTSPARSAYLRRTIVSGVAQNLSYWDSIHSDIDSHLKKAIPIRE
PISVFEPMHHLTFAAPKTTASALCVAACELVGGNREDAIVAASAIHLMHAAIYTHDHLML
TNSLQSDPETEPKISHKFGPNVELLTGDGILPFGFELLARSMDPAGDNSDDILKVIIEIT
RAVGSQGMVAGQDSDVEFDQLSSQTRRCLHGCGAACGAILGGGSHDEIERLRRYGSIAGK
IQGLLNEMDRNEGGKGQLAEKWRALALEELEYFDSKRIEQISTLVRA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgcacgtctttcgctcaccggaacaaatctaagccgtccatttacctcgccg
gcacggtcggcttaccttagacgtacgatagtctccggtgtggcccaaaacctatcttac
tgggattccatacattccgatatcgactcccacctgaaaaaagccatccccatccgtgag
cccatttccgttttcgagccgatgcaccacttgacatttgcggcacccaaaaccaccgca
tctgcgttgtgcgtcgccgcgtgtgagcttgtcggtggcaaccgtgaagatgcaattgta
gcagcgtcggcaattcacctcatgcatgctgctatatacacccatgatcatctcatgtta
acaaacagtctccagtccgatccagagacagaacccaaaatttcacacaaatttggcccc
aatgtcgagcttctcaccggagatgggattctgccgtttgggttcgagttacttgcgagg
tccatggatccagccggtgataactccgacgatattctgaaagtgatcatagagattaca
cgagccgtcggttcacaagggatggtcgccggtcaagattccgacgttgagtttgaccaa
ttgagtagtcaaacacgacgctgtctccatggatgtggggccgcctgcggagccatatta
ggtggtgggagccacgatgagattgaaagattgagaagatacggatccattgcaggtaaa
atacaaggactgttaaatgaaatggatagaaatgaagggggtaaagggcaattagcagag
aaatggagagctttagctctagaggagttggaatattttgatagcaaaagaattgagcaa
atttccacacttgtgagagcgtaa
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