KEGG   Lactuca sativa (garden lettuce): 111912961
Entry
111912961         CDS       T05352                                 
Name
(RefSeq) tubulin alpha-4 chain
  KO
K07374  tubulin alpha
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04145  Phagosome
lsv04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111912961
  09142 Cell motility
   04814 Motor proteins
    111912961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111912961
   03036 Chromosome and associated proteins [BR:lsv03036]
    111912961
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lsv04812]
    111912961
   04147 Exosome [BR:lsv04147]
    111912961
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111912961
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     111912961
Cytoskeleton proteins [BR:lsv04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    111912961
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111912961
  Exosomal proteins of other body fluids (saliva and urine)
   111912961
  Exosomal proteins of colorectal cancer cells
   111912961
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 111912961
NCBI-ProteinID: XP_023764450
LinkDB
Position
3:129443082..129445178
AA seq 449 aa
MRECISVHIGQAGIQVGNSCWELYCLEHGIKPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRKSLDIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNTAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAEVKRAVCMISNSTSVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESGDGDEDEGEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagggagtgcatctcagttcacatcggacaggctggtattcaggtcggaaactcctgt
tgggagctttactgtctcgaacatggaatcaagcctgatggccagatgccaagtgacaaa
actgtcggaggaggtgacgatgcattcaacacctttttcagtgaaacaggcgccggaaaa
catgtcccccgcgccatttttgtagatctcgaacccaccgtcatcgacgaagtcaggacc
ggaacataccgtcaactttttcacccggagcaactcatcagcggcaaagaagacgctgca
aacaacttcgcccgcggccactacaccatcggaaaagaaatcgtagacttgtgtttagat
cgcatccgaaaactcgccgacaattgcaccggtcttcaaggcttcctggtgttcaacgcc
gtcggcggcggaactggctccggtctcggctcgcttcttctcgaacgtctctccgttgac
tatggtaaaaagtcaaagcttgggttcacggtgtatccgtcgccacaagtttccacctcc
gtcgttgagccgtacaacagcgttctctccacccactctctcctcgaacacaccgacgtc
gccgtcctcctcgacaacgaagcaatctacgacatctgcagaaaatctctcgacattgaa
cgcccgacgtacaccaatctcaaccggttaatttctcaggtaatctcctccttaaccgct
tctctccgattcgacggagctttaaacgtcgacgttaccgaattccaaacaaatctcgtc
ccataccctcgaatccacttcatgctctcctcctacgctcccgtcatctccgccgagaaa
gcgtaccacgaacaattatctgtggcggagataacaaacacggcgtttgagccgtcgtcg
atgatggcgaagtgcgaccctcgccatgggaaatacatggcgtgttgtttgatgtacaga
ggtgatgttgttccgaaggatgtgaatgctgcggtggcgacgattaaaacgaagcggacg
attcagtttgtggactggtgtccgacggggtttaagtgtgggataaactaccagccgccg
acggtggttccgggaggggatctggcggaggtgaaacgggcggtgtgtatgatttcgaat
tcgacgagtgtggcggaggtgttttcgaggattgatcataagtttgatcttatgtattcg
aagagggcgtttgttcattggtatgttggtgaagggatggaggaaggtgagttttcggaa
gcgagggaggatttggcggcgttggagaaggattatgaggaggttggggcggagtccggc
gacggtgatgaggatgagggtgagtattga

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