Lactuca sativa (garden lettuce): 111912977
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Entry
111912977 CDS
T05352
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111912977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111912977
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111912977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
111912977
NCBI-ProteinID:
XP_023764468
LinkDB
All DBs
Position
8:complement(68618962..68625893)
Genome browser
AA seq
1444 aa
AA seq
DB search
MSWENEIVMRDITKASLVVSDRIGRDVSAQLDLEEALEASRYTSHPYSTHPREWPPLVEV
VDSRELPPVLIERYNAAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDSQCPEYSGE
EQAICAVGLVKARPGVFVEAIQYLLVLATPVELLLIGVCCSGNGDGTDPYAEVSLQPLQD
YTIPSDGVTMTSIACTNKGHIFLAGRDGHIYEMHYTSASNWHKRCRKVCLTSGLGSVVSR
WVVPNVFKFGAVDPIVEMAVDNERHILYARTEEMKIQVFSLGENGEGPLKKVTEEKNLIN
QRDLHNTTRQVAGSRGATRSTKASIVSISPLSTVESKWLHLVAILSDGRRMYLSTTKNSG
SVGGAFGSNLQKPSCLKVVTTRPAPPLGSFGSFSRAQNEDLSLKIESAHYSSATLVLSDS
SPSTTSSLLIVNRDSTTHSSSNLGTGVRSSRALRECVSSLPIEGRMLAVAEVLPLPETAA
TVQSLYSQLEFSGYDNSGESPEKLAGKLWARGDLPTQHILPRRRIIVFSTMGMMEVVFNR
PVDILRKLLESNTPRAILEDFFNRFGAGEAAAMCLMLASRVVQTESFINNVVAEKAAEAF
EDPRVVGVPQLEGSGVALGNTRTALGGFSMGQVVQEAEPVFSGAHEGVCLCASRLLLPVW
ELPVMVSDGSKDGIVGCRLSVDAMGVLEDKLRSVEKFLRSRRNQRRGIYGSVGGLGDLTG
SILIGTGGDLVSGNMGLARNFFNPYSRNLEASEIGTSSKRQRLPYSPTELASMEVRAMEC
VRQLLLRCGEALFLLQLLSRHHVTRLLQGFDHNTKQALTQLTFHQLACSEEGDKLATRLV
SSLMEYYTGPDGRGTVDDISGRLREGCPSFYKESDYKFYLAVECLEKAANASNNEERETL
ARDAFSKLSGVPESADLQTVCKRFEDLRFYEAVVRLPLQKAEALDPNGDALNEQIDDGIR
AHALAQRERCYEVIASALRSLKGEVSQREFGSPIRPSAHSLAPAARKKFICQIIQLGVQS
SDRIFHQYLYKTLIDLNLEDELLEFGGSDLVLFLQNAAREPTQQVRGVSGAQISSHQTKY
SELLARYYVLKRQHILAAHVLLRLAERRSTGLENHPTLDQRRQYLSNAVIQAKSASGNDS
LTNSSRDSGLLDLLEGKLTVLQFQIKIKEELEGIVSRIEASPSTSNTNNSNLDSLKEKVK
ELSLDLKSITQLYNEYAVPFELWEICLEMLYFASYSGDTDSNIVRDTWARLMDQAVSKGG
IAEACSVLKRIGSHIYPGDSAVLPLDTLCLHLEKAALERVVTGVEGVGDEDVARALMAAC
KGAVEPVLNTYDQLLSSGVILLSPTLKLRLLRSVLVVVREWAVSVSATGTGAASVGGSLL
RGTFSMDQRTAVHHGIRDKIASAANRYVTEVRRLNLPQSQIETVYRGFKELEESLLASFS
FERF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggaaaacgagattgtaatgcgagatatcaccaaagcgagtcttgtagtgagc
gaccgtatcggtagagatgtttcggctcagcttgacctagaagaagccctagaagcgtca
agatatactagtcatccttattctactcatcccagagagtggcctcctttagttgaagtg
gtagatagcagggagttgccaccagtactcatagaaagatacaatgcagctggaggagaa
ggcactgctttatgtggaatctttcctgagattcgtagagcatgggcatccgtagataat
tctttatttctttggcgttttgataaatgggatagccaatgtcccgaatacagtggtgaa
gaacaagccatctgtgctgttggtttagtcaaagcaagacctggggtttttgttgaagct
attcaatatcttctagtcttggcaacacctgttgagctgcttctcattggagtatgctgc
tctggaaatggtgatggaacagatccttatgctgaggtgtcattacagcctttacaagat
tacacaattccatctgatggagtcaccatgacatctattgcttgtacaaataaaggtcat
attttcttagctggacgtgatggacatatatatgagatgcattatacctctgcttcaaat
tggcacaaacgatgcaggaaagtttgtttgacttcaggccttggtagtgttgtttcaagg
tgggtggtaccaaatgtattcaaatttggtgctgtggaccccattgttgaaatggctgtt
gacaatgagagacacattttgtatgcccgaactgaagaaatgaagattcaagttttttca
ttaggtgaaaatggtgaaggaccacttaaaaaggtgacagaagaaaagaatttgatcaat
caaagggatctacataacactactagacaggtggcaggatctcggggtgccacacgttca
acaaaagcttctatagtttctatatcccctttatcaacagtagagtcaaaatggctacat
cttgttgcaatattatcagatggtagacgaatgtatctttccactactaaaaacagtggg
agtgttggaggagcatttggtagtaatcttcaaaaaccaagttgcttaaaagttgtcaca
acaagacctgcccctcctctagggtcatttgggtcattttccagagctcaaaatgaagat
ctttctttaaagatagaatcagcacattactcatctgcaacacttgtactttctgattca
tctccttcaaccacttcctcacttttaatagtgaatcgcgattccaccacccactcttct
tctaatttagggacaggtgtcagaagctcaagggcattacgggaatgtgtctcttcttta
cctatcgaaggccggatgttagctgtagcagaggtgttgcccttacctgaaacagccgcc
acagtacaatcactctactcacagttagagttttccggatatgacaactccggcgagtcg
ccggaaaagttggccggaaaactttgggcgagaggcgacctgccaactcagcatatactc
ccgaggagacgaatcattgtttttagtacaatgggaatgatggaagttgtttttaatcgt
ccggttgatattttaagaaaattgttggagtccaacacaccaagggcgatattggaagat
ttttttaaccgatttggagctggtgaagctgctgctatgtgtttaatgttggcttcaagg
gtagttcaaacggaaagttttataaacaatgttgtggctgaaaaggcagctgaggctttt
gaggatccgagagttgttggggtgcctcaacttgaaggtagtggtgtggcattgggaaat
acccgaactgcccttggtgggtttagtatggggcaagttgtacaagaagctgaaccagtg
ttttcaggggctcatgaaggggtttgtttgtgtgcttcaaggctacttttgcctgtgtgg
gagcttcctgttatggtttctgatggaagtaaagatgggattgttgggtgtaggctttct
gttgatgcaatgggagttttagaagataaacttagaagtgttgagaagtttttaagatca
agaaggaatcaaaggagggggatttatgggagtgttggtggtttgggtgatttgactggt
tcgattttgattgggacaggtggcgatttggtaagtggtaatatgggtttagcaaggaac
ttttttaatccttattctaggaatttggaggctagtgaaattgggacatctagtaaaagg
cagagacttccttacagccctacagaactagcttccatggaggtaagggcaatggagtgt
gtaagacaattgctcctaagatgtggtgaagctctatttctcctccaacttctttcacga
caccatgtcactcggttgcttcaaggctttgaccataatacaaagcaggcgttgactcag
ttgactttccaccagttagcttgttctgaagaaggtgacaaacttgcaacaagacttgta
tcttctctaatggagtattacaccgggccagatggtaggggaacagttgatgacatcagc
ggaaggttacgtgaaggatgtccaagtttttacaaagaatctgattacaaattctattta
gctgttgaatgtcttgaaaaagctgctaatgcttctaacaatgaagaaagggaaacactt
gcaagagatgctttcagtaaattaagtggtgttcctgaatctgcagatcttcaaactgtc
tgcaaacgcttcgaggacttgagattttatgaagcagtggttcgattgccacttcaaaag
gcagaggctttggaccctaatggagacgcccttaatgagcaaatagatgatggaattaga
gcacatgcacttgctcaaagagaaaggtgttatgaggttattgctagtgctttaagatca
ctaaaaggtgaagtttcacaaagggaattcgggtcacccatcagaccatctgcccattcg
cttgccccagctgcccgaaagaaattcatatgtcaaatcattcaacttggtgtccaatca
tctgacagaatctttcatcaatacttatacaaaacattgattgatttgaatcttgaagat
gaacttttggagtttggtggatccgatttggttcttttcttacagaatgctgcccgtgaa
cctacccaacaggtccggggtgtttctggagcacaaatttcctctcatcaaacaaaatac
tcagagcttttagcaagatattacgtgttaaaaagacaacatattttagcagctcatgta
ctacttcgattagcagaaagacgttctactggtctagaaaatcaccccacacttgaccaa
aggcgacaatacttgagcaatgcggtgattcaggcaaaaagtgcaagtgggaatgacagc
ctcacaaattcatcaagagacagcgggctattagatttacttgaaggaaaactaacagtt
cttcaattccaaattaaaatcaaagaggaattagaaggaattgtctcaagaatagaagct
tctcctagcacatcaaacacaaacaattcaaatctcgactctcttaaagaaaaagtcaag
gaattatctcttgatttaaaaagcatcacccagttatataacgaatacgccgttcctttt
gaactttgggagatatgtttggaaatgctatattttgcaagctattcgggcgacacagat
agcaacatagtacgtgacacatgggcaagactaatggatcaagcagtttccaagggagga
attgctgaagcatgttctgttctcaaaagaatcgggtcccacatataccctggagacagt
gctgttcttcctttagacacattatgtctacacctcgagaaagctgcattggagcgagtg
gttacgggggtggaaggtgttggagatgaggatgtggcaagggcacttatggcagcttgc
aaaggggcagtggaacctgtgttgaatacttatgatcagttgttatcaagtggtgttatt
ttattgtcacccactttaaaattaaggcttttgaggtcggtgttggtggtggtccgggaa
tgggcggtgtctgtttctgcaaccggaacaggggcggcttccgttggcggttcacttctt
cgcgggaccttttctatggatcagagaactgctgttcatcacgggattcgtgataagatt
gcaagtgctgcaaatcggtatgtgacggaagtacggaggttgaatctaccacagagccaa
atagagacggtatacagaggtttcaaagagcttgaagaatcccttttagcttctttttct
tttgagcgattttga
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