KEGG   Lactuca sativa (garden lettuce): 111913105
Entry
111913105         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111913105
  KO
K11790  denticleless
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111913105
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111913105
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_DCAF4 MIOS_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR11_1st Beta-prop_Nup120_160 WD40_RFWD3 NBCH_WD40 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 111913105
NCBI-ProteinID: XP_023764601
LinkDB
Position
3:182474453..182478330
AA seq 510 aa
MESSTYRPIFKDISSRELNGFRVRKRPRFVDDSSQFSEIGAFEFVHDDSATPPMALSFCK
TSRNAHIVAVTGEDGYVSLYNTRLKLPSSATHEANADKARVSEWLAHDNAIFDVCWIKED
TNLLTACGDHSIKLWDTQEQKCIGGLIGHTGSVKSISAHPVNEDIIVSGSRDGSFALWDL
RNSKRRRSHFSTSPIDIVKGAHSPNLKTRGRHGKAAAISITSVLYLKDEVTIATAGAADS
AIKFWDTRNLTTPFTQTSVHDRTKQKWVRSYGISSLSQDLNGVYISASCMDGRIYLLNVL
RLEKGPIKSFKGCDISTFFVKSKLSPDAGHILSGSSDGNAYVWQVNNHTADPVMLKGHNG
EVTAVDWCSSEIGKIATSADDSVVRLWNINNSCYSNTRSPSSIRKREFTIPKMKCRKLFE
EETKGSVNAPQPLLDPPLETSMAEIRTPESIKKQSSNLNLNSNSNSNLNLYIDETCEKSP
DPSFGSPSSVLNPPPSLKRKTILDYFMAHS
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggagagctctacatatcgaccgatcttcaaagacatcagctccagagagctcaatggc
ttcagagtacgaaaacgaccgcgttttgttgacgattcctcccaatttagtgaaatcgga
gcttttgagtttgtacatgacgacagtgctactcctccaatggctttatcattttgcaag
acaagcagaaacgctcatattgttgctgttaccggagaagatggatacgttagcttatac
aacactcgcttgaaactcccttcttcagcaacacacgaagcaaacgcagataaagctagg
gtatctgagtggcttgctcacgataatgctatctttgatgtatgttggataaaggaggac
accaatttattaacagcttgtggtgatcatagcataaagctatgggatactcaagaacaa
aaatgcattggaggacttattggacacactggaagtgtaaaatcaatcagtgctcaccct
gttaatgaagatatcattgtatctggttcaagagatggatcctttgctttatgggactta
agaaactctaaacgtaggcggtcccacttctccacttcgccaatagacattgttaaaggg
gcacatagtccaaatcttaaaaccaggggtagacatggaaaggctgctgctataagcata
acttcagttttatatctgaaagatgaggtcactattgctactgctggagctgcagatagt
gctataaagttttgggatacaaggaatcttacaactccatttactcagaccagtgttcat
gatagaacaaaacagaaatgggtaagatcatatggcatatctagcctctcccaagattta
aatggagtgtatatttctgcttcatgcatggacggcaggatatatctcttgaatgtactt
agactagagaaggggcctattaaaagcttcaaagggtgtgacatcagtacattttttgtt
aagtcaaaattgagtccagatgcagggcatatcctgagtggatctagtgatggaaatgca
tatgtatggcaggtcaacaatcatacagctgatcctgttatgcttaaaggccataatgga
gaagttactgcagtagattggtgctcatctgagataggtaaaatagcaacctctgctgat
gattccgtggtccgactatggaacatcaacaacagctgctattcaaatacccgatctcca
tcatcaatccgaaaacgagaattcacaattccgaagatgaaatgccgaaaacttttcgaa
gaagaaacaaaaggatctgtaaacgcacctcaacctttactcgatccaccactagaaaca
tcaatggcggaaattagaactcccgaatccatcaaaaaacagtcgtcgaatctgaatttg
aattcgaattcgaattcgaatttgaatttgtatatcgatgaaacatgcgagaaatcaccg
gatccgagttttggaagtccgtcttctgttttgaatcctccgccttctttgaaacgaaag
acgattttggattatttcatggcgcattcgtag

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