Lactuca sativa (garden lettuce): 111913299
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Entry
111913299 CDS
T05352
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111913299
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111913299
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
111913299
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
Rtf2
zf-RING_2
DUF5611
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Pellino_RING
zf-C3HC4_2
zf-Nse
PP_kinase_N
Motif
Other DBs
NCBI-GeneID:
111913299
NCBI-ProteinID:
XP_023764790
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Position
5:255687175..255688332
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AA seq
385 aa
AA seq
DB search
MDLKSLREEFDRVAKNQELSTTKYHQLIDKIEDEINSAITDLQSAADDTSSIDHKSVINH
LIDKLAAYSVKEQFKMMKKDLQVDLENYPKILGKFFETDISKAYINVEFDSQIVNQMILN
LLYHERRFDVADILLNESQEPDIFRVRSKYSEMHEILDALKARNLEPALSWMCVNRQKLH
QAGSKLEFDLRRLQFLEIFKANRSEANNFAQTHLSPFASIRSNEFLQITGCLLWPGDLEA
SPYSDLLSPEKWTEVSQELMVQFYSSMGMSLKNHLAVTVEAGAQGLPTFLEFANLAMISR
EEWAAMKEPPVDVELGREFQFHSVFVCPVTWEQSDKKNPAVMLPCGHVFSWRFIRNVSNQ
WRQVFKCPTCSVLDVSAAQCRQLFL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaaagccttagagaagaatttgatcgagttgccaagaaccaagaactttcc
acgactaaataccaccaactgattgataagattgaagatgaaattaatagcgcaatcacc
gaccttcaatctgcagcggacgacacctcctctatcgatcataaatcagtgatcaatcac
ctgatagacaagctcgctgcatatagtgtaaaagaacagttcaagatgatgaagaaggac
ctacaagttgatcttgaaaactacccaaaaatcttgggcaaattctttgagacagatata
tcaaaagcatacataaacgtggagtttgactcgcaaatagtcaaccagatgattctaaac
ctactttaccatgaacgtcgctttgatgtcgcagatattttgttaaacgaatctcaagaa
cccgatatttttcgggtaagaagtaaatattcagaaatgcatgagattcttgacgcattg
aaagctagaaatctggaacctgctctgagttggatgtgtgttaaccgtcagaaacttcac
caggctgggtcaaagcttgagtttgatctccggcgacttcaattcttggagatttttaaa
gcaaaccgatcggaggcaaacaactttgcccaaactcacctttccccatttgcttcaatt
cgcagtaatgagtttttacaaatcacgggctgcttattatggccgggagatctcgaagct
tcaccatattccgacttactatcgccggaaaaatggacggaggtgagccaagagctgatg
gtccaattctatagttctatggggatgtccttgaagaaccatttggcggtgactgtggag
gccggagctcaagggctgccgacctttttggagtttgctaatctggcgatgatcagtagg
gaggaatgggcggcaatgaaggagcctccggtggatgtggagttgggaagagagtttcag
tttcattcggtttttgtttgtccggtgacctgggaacaaagcgataaaaagaatccggcg
gtgatgttgccttgtggtcatgtttttagttggcgattcattaggaatgtgtcgaaccaa
tggagacaggtgtttaaatgtccgacttgttctgttcttgatgtgtcggctgctcagtgc
cggcaattgtttttgtga
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