Lactuca sativa (garden lettuce): 111913530
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Entry
111913530 CDS
T05352
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111913530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111913530
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111913530
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
111913530
NCBI-ProteinID:
XP_023765008
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Position
1:32482892..32485662
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AA seq
674 aa
AA seq
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MNKMKYIRLSSTSSIPKTTTSNLITANNQKASWWTQIFDPGGQFISRWNHMFLITCLMAL
FVDPLYFLVPEISKEKYCMRSDYGFAAIITVWRSLIDVISFIHIFIKFRTAYIAPNSRVF
GRGDLVMDPRKIALRYLRTGFSVDFAAALPLPQLFIWFVIPAVRSPTAAHANHSISLVII
LQYIPRLFVIFPLNQRITKTTGVIAKTAWAGAAYYIMLYMLASHVIGATWYLLAIERQYS
CWKEECAKEKNLSNPCNRVYFDCDHVDEPGRDAWLKQTQVLANCVSENSPINFTFGMYGP
AFAEGVTSAPFFEKYFFCFWFGLKSLSSYGQNLETSTSTGETLYGCGVCLGGLVIFCLLI
GNMQTYLQSTTARLEEWRVKRRDTEEWMRHRQLPPDLQDKIRRFVQYKWLATRGVDEEDI
LRALPLDLRRQIQRHLCLALVRRVPFFSQMDDDQLLHVICEHLVQSLSTKGQYLVREGDP
VNEMTFVIRGQLESSTTNGGRSGFYNSITLKAGDFCGEELLTWVLTPDSNVNLPSSTRTV
KALNEVEAFALRAEDLRFVAKQFKRLHSKKLQHAFRYYSHQWRTWGACYIQAAWRRHKRK
KLADELARQEGLFQYYYGDDSNDQNVQHLGATILASRFAANTKRGISHTETVVGSGSSSL
EMPKLFKPDEPDFS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatgaaatacattcgtctttcatccaccagtagcatcccgaaaaccacaaca
agcaatttaatcacagccaataaccaaaaagcgtcatggtggacccagatcttcgatcca
ggtggccagttcatttccagatggaaccacatgtttctaatcacctgcctcatggccctt
ttcgttgatccactttactttcttgtaccagagatctcaaaggagaaatactgtatgcga
tctgattatggttttgcagcaatcatcactgtttggcgttctctcattgacgtaatctcc
tttatccatatttttatcaagttccgaacagcttatattgccccaaattcaagggttttt
gggagaggtgatcttgttatggatccacgcaaaattgctttacgctacttaagaactggt
ttttctgttgattttgctgctgctctcccattgcctcagcttttcatttggtttgtgatt
ccagctgtgagaagtcctacagcagctcacgccaaccattcgatttctctggttatcatc
cttcaatatatcccacgattatttgtcatatttcctttaaatcaacgcattacaaaaact
acgggtgtaattgccaaaaccgcatgggcgggggccgcttactacatcatgctgtatatg
ctcgctagccacgttattggagctacatggtatttattggctattgagaggcaatattca
tgttggaaagaagaatgtgcgaaagagaagaacttgagtaatccctgtaaccgtgtttat
tttgattgtgaccatgtggacgagcctggacgtgatgcttggttaaaacaaactcaggtt
ttggctaattgtgtttccgaaaatagccctattaattttacatttgggatgtatggccct
gctttcgctgaaggagtcacatccgctccattcttcgaaaaatacttcttctgcttttgg
ttcggcttaaaaagtctaagttcatatgggcaaaatttggagacgagtacaagcacgggg
gaaacgctttatggttgtggtgtatgtcttggaggcttagttatattctgtttgcttatt
ggcaatatgcagacgtacctacaatcgacaactgcaagactagaagaatggagggtcaaa
agaagggacactgaagaatggatgagacacagacagttgccaccagatttacaggataaa
atccgtagattcgttcaatataaatggcttgcaaccagaggagtagatgaagaagacatc
ctacgtgctttacccttggatttacgacgtcaaattcagaggcatctttgtttggctctt
gttcgtcgtgtacctttcttctcgcagatggatgatgatcagcttctacacgtgatatgt
gaacacctagttcaatcgttaagcacgaaaggccaatatttggttcgagaaggggatccg
gtgaacgagatgacattcgtgataagaggtcagctcgagagctcgacgaccaatggaggg
cgatcgggattctacaactccatcactctgaaagcgggtgacttctgtggcgaagaatta
ctgacctgggttttaacccccgattcaaacgttaacctcccgtcgtcgactcgaacagta
aaagccctaaatgaagtggaagcgtttgcacttcgagcagaagatttgagatttgtagcg
aaacagtttaaacgacttcatagcaagaagctgcaacacgcttttaggtattactcgcat
caatggcggacatggggagcgtgttatatacaggcggcgtggagacggcataagaggaag
aaactagcggatgaattggcgaggcaagaagggttgtttcagtactattatggtgatgat
agtaatgatcagaatgtgcagcatttgggagcgacgatattggcgtcgagatttgcagcg
aatacgaaaagagggattagtcacacagaaacggttgtgggttctggttcctcgagctta
gagatgcccaaattgttcaagccggatgagcctgatttctcttga
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