KEGG   Lactuca sativa (garden lettuce): 111913545
Entry
111913545         CDS       T05352                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    111913545
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lsv01001]
    111913545
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsv03032]
    111913545
   03036 Chromosome and associated proteins [BR:lsv03036]
    111913545
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111913545
Enzymes [BR:lsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     111913545
Protein kinases [BR:lsv01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   111913545
DNA replication proteins [BR:lsv03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    111913545
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    111913545
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    111913545
SSDB
Motif
Pfam: PI3_PI4_kinase FATC TAN
Other DBs
NCBI-GeneID: 111913545
NCBI-ProteinID: XP_023765032
LinkDB
Position
1:complement(32980380..32999834)
AA seq 3026 aa
MVKSEDVHEIVLKLSSDKAKSREEGIKLLNTWLEGERLIEFCKYMGRNTSMLKPHEVPHA
KTWPFLVKLLTEAIKLEVSASKKRLPKLAFAKTLRIVVQRAEDGKSLHLLSVAKSLFNHI
WKILHDVPSFQSEYGIILRHLLAVKHLQFHLRKNVYSSLVLLYMEKVEISLSERSTGQSI
IKEEVFRCILTLHSLLDSPPGDFPDDLRVGITKGFIEIFSNLRDEGKILRKLVECINTYL
IRDGPNMGSRSLEIHDAVHQFLFRVWVTTHDRGLKDALVLYARLQLKLARGTTDGSVLLE
QLLDIIGKELDQISTSTTSLPWNDTTRDDKRGTLTNSQSSLMDLAAIVFCRACLVSFKAP
VADKRAKRENTVVYLNEQIIKGKWSWNAAFCFLIRNYSSRIKHEHFIYWFEGLSTNFERI
MNKATMEHAYDGLLWTLRSLQGLSSVLLRPIYGVECSAKVGFTNNQLYRGWHTIWNTLLR
GLPMFNNVTSVADAALILLGNINLSDPMNNFIVAHDVWDLRLFKNSPSVSLLRFISGYFS
KKGSHGDMQDVLHLRKDLLRTVMGLLNWKGHMVFNEHTVVLLPAAVFSLCAGSSCFTNCD
KGCSLAHLLVDIPVTIDDSIEVEKLEQESSHDLFDCSVEVLAEVFLDSHSEVAQAPSHQK
VRLPRHLRDSLLHETELGILEVLENKEIEKMILSDIFFRCALLSNFLYGSYVTRLKEENV
SFFSEVGQYMLEMLSHAVSVIEKRSSDIQCGSHGLNAGLEGMDSIQTSLKCFIGSPLFSY
QDGDGDCTFYNDIIWSTKKLLKALTKLYEGVSDGTRNLQSEIDQSDWPNRNNMTVLDAEL
DEIDDLEDDVDVMSSGGENSRVSPTVKWKLEIISLISSFFSVLPVDTWDVLFNLRRTESD
QRLMECLMLNLCEHPCWSSCQGFSDMVLSLDNMVDRLSDVKLQPTKILTAICGLLQTLMS
NKVTKEKNLGHSIKSGLSEQVASQTSMELILEDDSQSLVPLGDLVIKIAENDQFDWLGRV
KLIDCICNFILLSPQIGQAMVEKLLLMLRDPDFRVRFSLARRIGVLFQTWDGHDELFQDI
LSNFSVKLVVLFKDKLVKSNEVLAAGHQPRPIMETVIVTLVHLALHSEKIELEAVFMICV
IAAIDSSQRELVAAVLDNLSKKLQYNSRSEYIGELIAPIIFFWVQCGVSLAALVETRELF
VLNVEASNFIQFCCRWLLPALVLHSDVSNLNWVAKVSGQSSAALIKSHFVHIFSVCIALH
CSKRSGWESGAAALQSSILSISGLSEKERDTLIKRHMVSIVSYILSLASRLSEPALPFFT
KDTIQRAIQTVVDGFLNMEEAPCSMVVVDKINIFRPDRVFMFILEMHHKVTASIHHRHRC
NRLSGIEVLVNVLGHRAAVPSTSNYLFTLVGQFIDYGPLQDQCYHIISTLLKTLKDNQST
YGIDVLGEQLQFLVSKLVDSCIPSKFDIKHSLNHPSEALSLLHELIVDSDPSLHKHIKEL
PPFPAFDIFDRLRKFHGEVCQDYSARDHLLEFVRRSSHLPPRLVICSLKALHSIMFTGFE
RQKNAEQFFGDAFWQYDDEIVRAVWTLVRMASSDASNSFGAFVSDFLSMIGIGDPHRVVF
HLPGESNRIHICKPLYSDGGSGFSFHMDSGLSEELLIAVMQLLKKYLMDESVEIIEMASQ
ALRGILSTERGHRALLSLDSYERSILEVHSKGVNAQLVQSSLMDLERKFSGQAITIEKTS
TWETRDKTFETWISQLVYALIYFCDDTILRLCQDIVLLKAEVAELLLSNVMVNLAKRKNL
DIDLCKLISVKVVEEIVIESNSLIRSVQVILDALNELRLCHVMERATSAPSKTEGSKHAK
SSSYSSRSRSTPRKATDHTATSTQPLTSTLCWEKVYWLPIDYLVVAKSAIGCGSYFTAVL
YVEHWCQEHFSCLTLGSPDFSHLEMLPHHIEILVAAVTQINEPDSLYGIIQSHKLTSQII
TFEHEGNWSKALEYYDLQVRSEASIEMGNNSSRDQSLSSSSSKPEDEMKQRKPHKGLIKS
LQQIGCTHMLDMYCQGLMYKKGRFQDDLEFNELQFEAAWRAGNWDFSLLSMDTNSPKPSQ
RIRHSRFNQRLHSCLRGFHEGDVGEFNLNLKESKQELLFSIYHASEESTEYIYSTIVKLQ
IFCHLGLAWDLRWAWLDGKKDNDSEAQRLLSGPLTPNMDQLSWLNTEWSCILNRAQLHMN
LLEPFMAFRRVMLQILSCKDCTVQHLLESASILRKGSRFSQSAAALHEFKSLYIGMGGED
SKLYWLGRVEEAKLLRAQGQHEMAINLAKYISENRKMNEAAADVYRLVGKWLAETRSSNS
RTILEKYLKNAVNLADKHQSTDKKSVARQGQTHFQLAHYADALFRSYEERLTSNEWQAAM
RLRKHKTKELDALYRRFKNSSKGDKTDYSVKIQELQKQLTMDKEEAEKLQQDRDNFLSIA
LEGYKRCLVIADKYDVRVVFRLVSLWFGLSTRQIVVDGMLSTIKEVQSCKFIPLVYQIAS
RLGSSKDSQGPNTFQFALVSLLKKMAIDHPYHTIFQLLALANGDRVKDKQRSRSSFVVDM
DKKYAAETLLKELSSHHGAVIRQMKQMVEIYIRLAELETKREDTNKRMALPREIRSVKQL
ELVPVVTSSFPVDPSCQYEEGSFPHFKGLADSVTIMNGINAPKVVECLGSDGKRYRQLAK
SGNDDLRQDAVMEQFFALVNTFLQNHRDTWKRRLGIRTYKVVPFTPSAGVLEWVNGTLPL
GEYLTGSTRSGGAHGRYGTGDWSFPKCRQHMATENNKRKAFQEVCDNFRPVMHHFFLERF
LHPADWFEKRLAYTRSVAASSMVGYIVGLGDRHSMNILIDQATAEVVHIDLGVAFEQGLM
LKTPERVPFRLTRDIIDGMGVTGVEGVFRRCCEENLSVMRTNKEALLTIIEVFIHDPLYK
WALSPLKALERQKETDDDLEASLEESEEGYEGNKDAARALLRVKQKLDGYEEGEMRSVHG
QVQQLIQDAIDPDRLCQMFPGWASWL
NT seq 9081 nt   +upstreamnt  +downstreamnt
atggtcaaatctgaagatgtccatgaaatcgttttgaaactctcatctgataaggccaaa
tcccgtgaagaagggattaagttgttgaatacatggctagaaggagaaaggttgattgag
ttctgtaaatatatgggacgcaatacatccatgctcaaacctcatgaggtaccacacgct
aaaacttggccttttcttgttaaattgctcactgaagctataaagttggaggtatctgca
agtaagaagcggctgcccaagttggcatttgcaaagactcttagaattgtggtacaacga
gctgaagatggaaagagtttacatcttctctctgtggcaaaatcacttttcaatcatata
tggaagattttacacgatgttccaagctttcagtccgaatatggaattattctacgacat
cttttggcagttaaacatcttcagtttcacttgagaaagaatgtgtactctagtctggtg
cttctatacatggaaaaggttgagataagcttgagtgaacgcagtaccggacaatcaatt
attaaggaggaggtctttcggtgcatcctcacacttcattcacttcttgatagtcctcct
ggagattttcctgatgatcttcgtgtgggaataacaaaaggttttattgagattttctct
aatttaagggatgaggggaagattttgcgcaaattggttgagtgtattaatacatatttg
attagggatggtccaaatatgggcagtcgatctttagaaattcatgatgctgtgcatcag
tttctttttcgtgtttgggtaacaactcatgatcgtggtctgaaggatgcacttgtttta
tacgcaaggttacaattaaagttagcaagaggaactactgatggcagtgttttattggaa
caacttttggatataataggaaaggaactagatcaaattagtacctccactaccagtctg
ccatggaatgatacaacaagggatgataagcgaggtacattaacaaactcacaatccagt
ttgatggatcttgcagctattgtcttttgtcgggcatgccttgtttcgtttaaagcgcct
gtagctgataaacgagctaagagggagaatactgttgtctatttaaacgaacaaatcatc
aaagggaagtggtcttggaatgcagcattttgcttccttattcgcaactactctagtcgc
attaagcatgaacatttcatatactggtttgaaggactatccacaaactttgagagaata
atgaacaaagcaaccatggagcatgcttatgatggtcttctgtggactctacggagtctt
caaggactttcatcagtacttctacgtcctatttatggagtggagtgctcagcaaaagtg
ggatttaccaataatcagttatacagaggctggcatacaatatggaacactctactgcgt
ggtttaccaatgttcaacaatgttacatcagttgcagatgctgctcttatactccttgga
aatattaatttgagtgatccaatgaacaactttattgtagctcatgatgtatgggatctt
cggttgtttaaaaattctccatcagtgtctcttttacgcttcatatcaggttacttttca
aagaaaggatcccatggtgacatgcaggacgttttacatctgagaaaagatctcttaagg
acggttatgggcttacttaactggaagggacatatggtgttcaatgagcatacagttgta
ctgttgccagcagctgtattttctctttgtgctggttcctcttgctttacaaattgtgat
aaaggatgttctttggctcatcttcttgtagatatccctgtaaccattgatgacagcatt
gaggttgaaaaactagagcaggaaagttcacatgatttgttcgattgctctgtggaagtg
cttgctgaagtttttctcgattctcattcagaggtagcccaggctccgagccatcagaag
gttcgtctcccccgtcatttaagggactcactgcttcatgaaacggagctcggaattctt
gaggttttggaaaacaaagagattgagaaaatgattctctcagatattttcttcagatgt
gctcttttgtcaaatttcctgtatggttcgtatgttacaaggttgaaagaagaaaacgtt
tctttcttctccgaagttggtcagtacatgttagaaatgctgagtcatgctgtttcagtg
attgaaaaacgttccagtgatattcagtgtggtagtcatggcttaaatgctggtcttgag
ggcatggactccattcaaacttctttaaaatgttttattggttcccccctctttagctat
caagatggtgatggtgattgtacgttttataatgatattatctggtcaaccaagaaactt
ttgaaggctctgactaaactatatgaaggagtttctgatggcacacgtaatcttcagtct
gagatagatcaatcagattggccaaatcgcaataatatgactgtcttggatgcagagctt
gatgaaattgatgatttagaagatgatgttgatgttatgagtagtggtggagagaattct
cgagtgtctcctactgttaaatggaagctggaaattatatcattaatctcaagctttttt
tcggttcttccagtcgacacatgggatgttttgttcaatttgaggcgaacagaaagtgat
caaaggctgatggaatgccttatgcttaacctttgtgaacatccttgctggtcctcttgt
caagggttttctgacatggttttatcactggacaacatggttgataggctttctgatgtt
aagcttcagccaactaagatactgaccgctatatgtggcctgttacagactttgatgtca
aacaaagttacaaaggaaaagaatctcggtcattctataaaatcaggattatctgaacag
gtggcatcacaaacttccatggagctaattctagaggacgactctcagagtttggtacca
ctgggtgatcttgttatcaaaattgcagaaaatgaccaatttgattggttaggtcgtgtg
aagctcattgattgcatatgcaactttatattacttagtcctcaaatcggtcaggccatg
gttgagaagctgctacttatgctccgagatcctgatttccgtgttcgattttccctagca
agaagaattggtgttcttttccaaacgtgggatggccatgatgagctcttccaggacata
ctgtcaaattttagtgtaaaattggtggtgttatttaaggataagctcgttaaatccaat
gaggttttagctgctggtcatcaaccacgccctatcatggaaaccgtcattgtaaccctt
gtgcatcttgccctgcacagtgagaaaattgagttggaggctgtttttatgatctgtgtt
attgctgctattgattcctcccaaagggaactggttgctgctgtacttgacaacctatct
aaaaaactacaatacaactccagatccgagtacattggagagcttattgcaccaattatt
ttcttctgggtccagtgtggtgtaagcttggctgcattagttgagacacgtgaacttttt
gttctcaacgtggaagctagtaatttcattcaattttgttgccgttggcttcttccagct
ttggttttgcatagtgatgtttccaacttgaactgggttgccaaggtttccggtcaatct
tctgcagcacttatcaagagtcactttgtacatatcttttcagtttgtatagcattacat
tgcagcaaaaggtctgggtgggaatctggagcagcagcacttcagagttcaatattaagt
atctctggtttatctgagaaagagcgggacacccttattaagagacacatggtttctatt
gtcagttacattttatcacttgcttcccgattatcagaacctgcattgcctttctttacc
aaggataccattcaacgtgctattcaaactgtggtcgatggtttcttgaacatggaagaa
gctccttgcagcatggttgtagtggacaaaatcaacatttttcgccccgatagagttttt
atgttcatacttgaaatgcatcataaagttacagcgtctattcaccataggcacagatgt
aacaggttgtctggtattgaggtgcttgttaatgttcttggacatagagctgcagtacca
agcacttccaattatcttttcaccttagtggggcaattcattgattatggtcctttacaa
gaccaatgttatcatattatctctacattgctcaaaacccttaaagacaaccaatctaca
tatggtattgatgtgcttggtgaacaacttcagtttctggtatcaaagctagttgattct
tgtataccctcaaaatttgatattaaacattccctcaatcatccatctgaggctttgtca
ctgcttcatgagcttattgtggattctgatccatctcttcataagcatatcaaagaactt
cccccctttcctgcatttgatatatttgatagactacgtaagtttcatggcgaagtgtgc
caagattactctgcaagagaccacttattagagtttgtgagaagatctagtcatcttcca
ccaaggctggttatatgcagtctcaaagctttgcacagtatcatgttcacggggtttgag
cgtcaaaagaatgcagagcagttttttggagatgcattttggcaatatgatgatgaaatt
gtacgtgcagtttggactctagttcgaatggccagttcagatgcatcaaacagttttgga
gcatttgtttctgattttttatcaatgattggtattggggatccacatcgtgttgttttc
catcttcctggagagtcaaaccggatacacatttgcaagcctctttattcggatggtggt
agtggcttcagttttcatatggattcaggtttatctgaagagctcttaattgcagtgatg
cagcttttgaagaagtatttgatggatgaatctgtcgagataattgagatggcatcacaa
gcattacgtgggatactttcaactgaaaggggtcaccgagctttactgtcacttgattct
tatgagaggtctatactcgaggttcactccaagggtgttaatgcacagctagttcagagt
tccttaatggatctagaaaggaagttcagtggtcaagccattacaattgagaagacttct
acatgggagactcgtgacaaaacatttgagacatggatctctcagctagtttatgcactc
atttatttttgtgatgatactatcttaaggttatgccaggatattgtgctgctgaaagct
gaagttgcggagcttcttttgtcaaatgttatggtcaatcttgcaaagaggaagaattta
gacattgatctttgcaagctgatctccgtgaaggtggtggaagagatagttattgaatcc
aatagcttaatcagatcagttcaggttattttggatgcactcaatgaacttcgactctgt
catgtaatggagagagctacttctgctccttctaaaaccgaaggctcaaagcatgcgaag
tcatctagttatagctcaagatctcgttctacaccacgtaaggcaacagaccatactgca
acatctactcaaccactcacttctacattatgttgggaaaaggtttattggcttcccatt
gactaccttgttgtcgctaagtcagccattggctgtggctcatacttcactgctgtgttg
tatgtggagcactggtgtcaagagcattttagctgcctcacgttaggaagtccagatttt
tcccatctagaaatgctaccacaccacatagaaattctagttgcagcagttacccaaata
aatgaaccagacagtttgtatgggatcatccagtctcacaagctgacatcacaaataatc
acctttgagcatgagggtaactggagtaaagctcttgagtactacgacctacaagtacga
tctgaggcatcgattgagatgggtaataatagttcccgtgatcaatccttatcttcatct
tcctccaaaccagaagatgaaatgaaacaaagaaaaccacacaaagggctgatcaaatct
ttacaacaaattggttgcactcatatgttggatatgtattgccaagggctaatgtacaaa
aaaggccgctttcaggatgacttagagttcaatgagctacagtttgaagctgcttggcgt
gcagggaattgggatttctctctactgtccatggacactaattctcctaagccaagtcaa
cggatcagacatagccgtttcaaccaaaggctacacagctgtttgaggggtttccatgag
ggagatgtgggcgaatttaacctgaacctcaaagaatctaagcaggagcttctgttctct
atctatcatgcaagtgaggagagcacagaatatatttattccactattgtgaagctccag
attttctgtcatcttggactggcctgggatttgcgatgggcatggttggatgggaagaaa
gataatgacagcgaggcacaaagattactatctggacctttgactcccaacatggaccag
ttgtcatggttgaatacggaatggagctgcattctgaatcgtgcacagttacatatgaac
ctgttagaaccattcatggcattcagaagagttatgcttcaaattttaagctgtaaggac
tgtactgtccaacatcttttggaatctgcatctattcttcgtaagggctctagattttct
caatctgctgcggcattgcatgagtttaagtccctctacattggtatgggaggagaagat
tctaaactctattggcttggaagggttgaagaagcaaagcttctgcgggcccaaggtcaa
catgagatggcaattaatcttgccaagtacatctctgaaaatcgcaaaatgaatgaggcg
gcagcagatgtatatcgtctagttggaaaatggctggctgaaacacgttctagcaactct
aggactatcttggagaagtatctgaaaaatgcggtcaaccttgctgacaaacaccagtca
acagacaagaagtcagttgcaagacaaggacaaacacatttccagcttgctcattatgcg
gatgctcttttccgtagctatgaggaaagactcacctctaatgagtggcaagcagcaatg
cgcttgagaaaacataagacaaaagagttggatgcactttataggcgattcaagaattca
tccaagggtgataaaacagattattcagtaaaaatacaagagttgcaaaaacaacttaca
atggacaaagaggaggctgaaaagttgcagcaagatagagataatttcctcagcatagca
ttggaaggatacaagcgatgtctagtcattgccgacaaatatgatgttcgagtggtgttt
cgacttgtatctctgtggtttggtttatccacaagacaaattgttgtagatgggatgctc
agtacaatcaaagaggtgcagtcttgcaagtttataccattagtataccaaattgcttca
aggctgggtagctcaaaagatagccagggacctaatacttttcagttcgctttggtttct
ctattaaagaaaatggcaatcgaccatccataccacacaatctttcagcttttggcactg
gccaatggtgatcgtgtcaaggataagcaacgaagtagaagctcatttgtggtggatatg
gataaaaagtacgctgcagaaacgctcttaaaagagttatcctcgcaccatggagctgtg
atcagacaaatgaaacagatggtagaaatttatatccggcttgctgaactggaaacaaaa
cgagaggataccaataaaaggatggctctcccaagagaaattcgcagtgtcaagcaactt
gaactcgtacctgtggtgacatcatcttttccggttgaccctagttgtcagtatgaggaa
gggtcattcccacatttcaaaggcttagcagattcagtcacgatcatgaatggcataaat
gctccaaaagttgtcgagtgtcttggttcggatggtaaaagatatcgacagcttgcgaaa
tcaggaaacgatgacctcagacaagatgctgtaatggaacagttctttgcattggtgaat
actttcttacagaaccaccgtgatacgtggaaaagaagattagggatacggacatataag
gtggttccttttactccaagtgctggtgttctcgagtgggtaaatggcactttaccttta
ggtgaatatcttacaggaagtacaagaagtggaggtgcccatgggcgttatggaacagga
gattggtcatttcccaaatgcaggcaacacatggctacagaaaataacaagcgcaaggca
ttccaggaagtctgtgacaatttcagaccagtgatgcatcacttttttctagagaggttt
ttacatccagctgactggtttgaaaaacgacttgcttatacaagaagtgtggcagctagt
tcaatggttggttacattgtgggtcttggagatcgacattccatgaacatcctaattgac
caagcaactgcagaagttgtacacattgatctgggtgttgcatttgagcaaggattgatg
ctaaaaacacctgaacgggttcccttcaggctcacaagagacatcatagatggtatggga
gtaactggagtggaaggcgttttcagaaggtgttgtgaggaaaatctttcagtcatgcgc
acaaataaagaagctttgctcaccatcattgaagtttttatccatgatcctttatacaag
tgggccctatcacccctaaaagctttggagcgccaaaaggaaactgatgatgatctggag
gcaagcttggaggagtctgaagaaggatatgaaggaaataaagatgcagcacgtgctctt
ttgcgtgttaagcagaaacttgatggatatgaagagggtgaaatgagaagtgtgcatgga
caggttcaacaactgatacaggatgcaatcgatcctgatcgcctatgtcaaatgtttcct
gggtgggcgtcttggctctaa

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