Lactuca sativa (garden lettuce): 111913568
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Entry
111913568 CDS
T05352
Symbol
LOC111913568
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111913568 (LOC111913568)
Chaperones and folding catalysts [BR:
lsv03110
]
Heat shock proteins
HSP100
111913568 (LOC111913568)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_18
AAA_28
NACHT
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DISC1_C
Motif
Other DBs
NCBI-GeneID:
111913568
NCBI-ProteinID:
XP_023765060
LinkDB
All DBs
Position
1:33429578..33434961
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AA seq
925 aa
AA seq
DB search
MAGALVQSTSFPSTVAGDRKVRSKRSGNTKGEIKMMYSVQTPHMSVRSFSGLRGTNALDN
LVKRGQDFHSKVAAATSVRKAKPSRIVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPNNIRTQVIRMVGESAEAVG
AGVGGGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLP
DKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMD
LKTQISALVDKNKEMSKAETEAGEEGPIVTEVDIQHIVSSWTGIPVDKVSTDESERLLKM
EETLHKRIIGQDEAVVAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEI
ELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD
GNVTVLNGGTGAAPPPEALPEAIGV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggctctggttcaatccaccagctttccttcaacggttgctggagatcgtaag
gtccgttcgaagagatctggtaatacaaaaggagaaatcaagatgatgtatagcgtacaa
actcctcacatgagtgtaaggtctttctctggtttgagaggaaccaatgctttagacaac
ttggtaaaaaggggtcaagatttccattcaaaggttgcagctgccacctctgttcggaaa
gcaaagccttctcgaattgtgccaaaagccatgtttgagcgcttcactgagaaagctatc
aaagttattatgcttgcacaagaggaggctagacgacttggtcacaactttgtgggaact
gagcagatcttattaggtcttattggtgagggcactggtattgctgcaaaggtgttgaaa
tcaatggggattaatttgaaagatgctcgtgttgaggtagagaagattatcggtagagga
agtggatttgttgctgtagaaatcccatttacgcctcgtgcaaagcgtgttttggagctt
tcattggaggaggcgcgtcaacttgggcataattatattggatctgagcacttgcttctt
ggtttgcttcgtgagggtgaaggagtagcagctcgtgttcttgagaatttaggtgcagac
ccgaataacattcgcacacaggttatcagaatggttggtgagagtgcagaagctgtgggt
gctggagttggtggtgggagctccaacaacaagatgccgacacttgaggaatatggcacc
aacttgacaaaactagcagaggagggtaagttggatcctgttgtgggaagacaaccacaa
atcgaaagagttacacagattttgggcaggcgtactaaaaacaatccctgtcttattgga
gaacctggtgttgggaaaacagctattgcagaaggccttgcccaaagaattgcaaatggt
gatgttccagaaacaatagaggggaagaaggtgataactctagacatgggtcttcttgtg
gctggaacaaagtatcgtggggagtttgaggagagattaaagaagttaatggaggaaatt
aaacaaagtgatgaaattattctatttatcgatgaggttcatacactaattggagctgga
gcagcagagggggctattgatgctgctaacattttgaagcctgctcttgctagaggtgaa
ttgcagtgtattggtgcaacaacacttgatgaataccggaagcatattgagaaggaccct
gcattggagagacgattccagccagtaaaggtaccagagccaacagttgatgaaacaatt
cagatcttaaagggtcttcgtgagcgatatgagatccaccataagcttcgctacaccgat
gaagcattagttgctgctgcacagttatcatatcagtacataagtgatcgttttcttccc
gataaagcaattgatttggtcgatgaagccgggtctcgtgttcgtctacgtcacgcacaa
ctcccagaggaagcccgagagcttgagaaagagcttagacagataaccaaagaaaagaat
gaagcagttcgtggccaagattttgagaaggccggggagttgcgggatagagaaatggat
ctcaagacccaaatatcagcactcgtggataaaaacaaagagatgagcaaagcagaaacc
gaagcaggggaggaaggcccaattgtaacagaggtcgacattcagcacatcgtatcttcc
tggaccggcatcccagtggacaaagtctcaaccgacgaatccgaacgcctcctcaaaatg
gaagaaacccttcacaaaagaatcatcggtcaagacgaagcagtcgtagccataagccga
gccatccgccgagcccgtgtcggtctaaaaaaccccaaccgccccatcgccagtttcatc
ttctcgggtcccacgggtgtcggtaaatccgaactcgctaaagccttagccgcatactac
ttcggctcagaagaagccatgattcgtctcgacatgagtgagttcatggaacgccacacc
gtctcaaagctcatcggttcaccgcccggttacgttggctacaccgaaggcggtcagtta
accgaagcggttcgccgccgcccctacaccgtcgtcctcttcgacgaaatcgaaaaagcg
catcccgatgtcttcaacatgatgcttcagatcctcgaagacggacgtttgaccgatagc
aaaggccggacagttgactttaaaaacacgcttttgatcatgacttcaaatgtcggaagt
agtgtgattgaaaagggagggagaagaatcgggtttgaccttgactatgatgaaaaggat
agcagttacaacagaatcaaaagtttggtcaccgaggagctaaaacagtatttccgaccc
gagtttttgaacaggttagacgaaatgattgttttcaggcaactaacgaagctcgaagtg
aaggaaattgcggatataatgttgaaggaagttttcgagaggctaaaagtgaaggaaatt
gagcttcaggtgactgaaaggtttagagacagggtggttgaggaaggatataatccgagt
tatggtgcgagacccttaaggagagctatcatgaggctactggaagacagcatggccgag
aagatgttggcacgggaaatcaaggaaggtgattcggtcattgtggatgttgattccgat
ggtaatgtgacggttcttaatggcggcaccggagcggctccaccaccggaggctttgccg
gaggcgattggagtgtag
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