Lactuca sativa (garden lettuce): 111913699
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Entry
111913699 CDS
T05352
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111913699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111913699
Spliceosome [BR:
lsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111913699
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Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF4200
Motif
Other DBs
NCBI-GeneID:
111913699
NCBI-ProteinID:
XP_023765180
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Position
8:complement(303295734..303299748)
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AA seq
485 aa
AA seq
DB search
MANLEDSFLADLEDLSDNDNENLDEENVDAENMEEDVNKDIADIEALKYDDLDNVSKLQK
TQRYTDIMKKVENALEKGSNMSNQSMVLEDDPEYQLIVECNTLSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPENTLQKTIEACDRALTLDASKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
TSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQTTPPGLKMRACRLLAAK
STLAARVDSIRGDPSGKQGRMYREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAA
KVAKKGKDKQYSSGGATSGLTSSLAFTPVQGIDLIDPQADANRLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttgaagattcttttcttgcagatcttgaggatctatccgacaacgataat
gagaacctggatgaagaaaacgtggatgcagaaaacatggaagaagatgtgaataaagac
atagccgatatagaagccctcaagtacgatgacttagacaatgtctcaaagctacaaaaa
acacaacgttacacagacatcatgaaaaaagtcgaaaatgcccttgaaaaaggatcaaac
atgtcaaaccaatccatggttctagaagacgatccagaataccaactaatagtcgaatgc
aacacattatcagtcgacatagaaaacgaaatcgtcataatccacaattttatacgcgat
aaataccgattaaaatttcccgaactcgaatcccttgttcatcacccaatcgattacgca
cgtgtagtcaaaaaaatcggaaatgaagttgacttaaccctagttgacttagaaggtctt
ctcccttcagccataatcatggttgtttcagtcacagcctccaccacaagtgggaagcca
cttcccgaaaataccctccaaaaaacaatcgaagcatgcgatcgtgcccttacattagac
gcttcaaaaaagaaagttctagattttgtagagagtagaatgggttatatcgcaccgaat
ctttccgcgattgttggaagtgcagttgctgcgaaactgatggggacagctggcgggctg
acatcacttgcgaaaatgccagcttgtaatgtgcagcttttgggtgctaaaaagaagaat
ttggcgggattttcaactgctacttctcagtttagagttgggtatattgagcaaacggag
gtttttcagacaacgcctccagggttaaagatgagggcttgtagacttttggctgcaaag
tcaacgcttgctgcgcgagttgactcgattaggggggacccgtctgggaaacaagggaga
atgtatagggaagagattaggaagaagattgaaaaatggcaagaaccaccgccagctaag
caacctaagccacttcctgttccggattctgaacctaaaaagaaaagaggtgggagacga
ttgaggaaaatgaaagagagatatgcgattacagacatgaggaaactggcaaacagaatg
caatttggagtgcctgaagagagctcattaggtgatggactaggagaaggatacggtatg
cttggtcaagctggaaacggaaagcttcgtgtttcagttggtcaaagcaaactcgctgct
aaagttgctaaaaagggcaaagataaacaatatagtagtggtggggctacctctggattg
acgtcaagtttagctttcacacctgttcaggggattgatcttatagatccacaagcagat
gctaatagacttgggagtggaacacagagcacgtatttttcagaaacaggaactttttca
aagatcaagaggacgtga
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