Lactuca sativa (garden lettuce): 111913765
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Entry
111913765 CDS
T05352
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111913765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111913765
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111913765
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
111913765
NCBI-ProteinID:
XP_023765239
LinkDB
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Position
8:complement(85189270..85192060)
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AA seq
535 aa
AA seq
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MDTAEQNRVRSIKLWPPSQNTRQVLVDRIIKNLTTPSILSRRYGVLSKEEAEEEAKQIES
SAFATANQLFEKEQDGDGKSSVELYAKTSSTLMVEAIKRGPKSKEEQEPLFETITENDQT
LFDISKGDRSFLDAEKTKQLLKPLQDSGNKYTKICFSNTSFGVDAARVAVPILSLVKDQL
KEVNLSDFIAGRPEEEALEVMSMFSLALDGSDLRYLCLSNNALGEKGVRAFSELLSSQNN
LEELYLMNNGISEEAAKAVCELIPSTKKLKTLHFHNNMTGDEGAISISELLKKSPILEDF
RCSSTRVGSEGGVALSDAISKCTLLKKLDLRDNMFGVEAGLALSKAISVFSNLTEIHLSY
LNLEDEGASVLVNALNNSGSPLEVVEMAGNDITVKSASSLAAFLISKRESLTKINLSENE
LKDEGSMVISKALEDEFPRLTEVDLSSNQIRRAGARVLAQVVVGKPGFKLLNINGNFLSD
EGVEDVKEIFKNSPDLLGPLDENDPEGEDYNDEDGDDDDDDLESRLKGLDIKQEE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggatactgctgaacaaaaccgtgtgcgctcaatcaagctatggcctcctagccaaaac
acaagacaagtgcttgtagatcgtataataaaaaaccttacaactccatccattttatct
agaagatatggtgttttaagcaaggaagaagctgaagaagaagctaaacaaatagagtct
tcagcctttgccactgcaaaccaactctttgaaaaggaacaagatggtgatggaaagtct
tctgttgaactttatgctaaaacatctagtacactcatggtagaagctatcaaaagaggc
cctaaatcaaaagaagaacaagaacccttatttgaaactatcacagaaaatgatcaaact
ctttttgacatctctaaaggcgatcgatccttcttagatgcagaaaaaactaaacaactg
ttgaaaccacttcaagattctggaaacaagtatactaagatatgttttagcaatacaagc
tttggggtggatgcagctcgtgttgctgttcccattttgtccttggtcaaagatcagtta
aaagaagtcaacctatctgattttatagctggaagaccagaggaagaagcacttgaagtt
atgagtatgttttctttagctcttgatggatctgatttgaggtatctatgtctttcaaat
aatgccttgggtgagaagggtgttagggcattcagtgaacttttaagttcccaaaataac
cttgaggagttgtatctaatgaacaatgggatctcagaggaagctgcaaaggcagtttgt
gagttgattccttccacaaagaagctcaaaactcttcattttcataacaacatgactgga
gatgaaggtgcgatttccatttctgaacttttgaaaaaatctccaatcttggaggatttc
agatgttcttccactagggttggctctgaagggggtgttgctctatctgatgcaatttcc
aaatgtacccttttgaaaaagcttgatcttcgtgacaatatgtttggtgtggaagccggg
cttgctttgagcaaggctatatctgtcttttcaaatctcactgaaatccatctaagctac
ttgaatttagaagatgaaggagcttcggttcttgtgaatgctctcaacaattctggttct
cctcttgaagttgttgaaatggctggaaatgacattacagttaaatcagcttcttctttg
gctgcttttctgatatccaaaagagaatctttaaccaagataaatctctctgagaatgaa
ctgaaggatgagggtagtatggtaatttccaaggcgcttgaagatgagtttccacggttg
actgaagttgacctaagcagtaatcagattcgaagggctggagcaagggttttggctcag
gtggttgtaggtaaaccagggtttaagctgttgaatattaatggtaactttttgtctgat
gaaggggttgaagatgttaaagagattttcaagaattcacctgatttgcttgggcctttg
gacgaaaatgaccctgaaggtgaagactacaatgatgaggatggtgatgatgatgatgat
gacctggaatccagactcaagggtcttgatattaagcaggaggaatag
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