Lactuca sativa (garden lettuce): 111913799
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Entry
111913799 CDS
T05352
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1 isoform X1
KO
K25869
zinc finger protein IDD1/2
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111913799
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111913799
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_6
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
111913799
NCBI-ProteinID:
XP_023765277
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Position
4:228594706..228597409
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AA seq
534 aa
AA seq
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MVDFENSSAMAVSATSVEGTECSSGGNETAPNPPPELQPIKKKRNLPGMPDPDAEVIALS
PTTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRDGKEIRKRVYVCPEKTCIH
HDPSRALGDLTGIKKHFSRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGTKEYRCDCGTL
FSRRDSFITHRAFCDALAQESARSQSQSQTPSLPITNSNHHNHLQETEKVQAAILPPSCS
PPPPPHTPSTGVLSPVQSVHSSAELPEKSTGILEHQKGAGATLEVVEAAAAAETCLPTTT
TTTASGGSTSSGNNNNNASNNNTGVFASIFASSSVLPPSQSSPATYSNLMCGVAGADRNT
TVEPMSLSLSSSLYRSTTAAPSLFPPPEQTLHQHHRQYVQTQQPALSATALLQKAAQMGA
TSSNTSFLHALGLAPPSSSSTDRYQEASVSQWSNIQSKQERNDNLMGPPPPTTLDFLGLG
MGGGGSSGGYSAFLSSIGGSSLNVNSAAGVPFRGVTSVQNDDWDDSGDKKPALH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggtagattttgagaattcttcggcaatggctgtttctgcaacttcagttgaaggaact
gaatgttcatccggtggtaacgaaacagcacctaatcctcctcctgagctgcaaccgata
aagaagaagagaaatcttccaggaatgccagatccagatgcggaggtgatcgcactatca
ccgacgactctactagccaccaatcggttcgtatgcgagatctgcaacaaaggattccag
cgggaccagaaccttcagcttcatcggagaggtcataacttgccgtggaaattaaaacag
cgagatggaaaggaaatccggaaacgcgtttatgtttgtccggagaaaacctgcatccac
catgatccgtctagagcactcggcgatctcaccggaatcaaaaagcacttctccaggaag
cacggcgagaaaaagtggaagtgcgagaggtgctcgaagaagtacgccgttcaatccgat
tggaaagcgcatatgaaaacgtgtggtacaaaggaatacagatgtgattgtggcacctta
ttttctaggagggatagcttcattacgcatagagctttctgtgatgcattagctcaagag
agtgcgagatctcaatctcaatctcaaactccaagccttcccattactaattctaatcat
cataatcatctacaagaaactgagaaagtgcaggcggctattcttccaccgtcgtgtagc
ccgccgccaccgccgcatactccttccaccggcgtactctctcctgttcaatccgttcac
agctcagcagagttgccggaaaaatccacgggtatactagagcaccagaagggggcgggg
gcgacattggaggtggtggaggcagcggcggcggcggagacatgcctcccaacaaccaca
acgaccaccgctagtggtggctcaacctctagtggaaacaacaacaacaatgcgagtaac
aacaatacaggcgtatttgcaagtatttttgcatcatcctccgtcttgccgccgtctcaa
tcatctccggcaacgtactctaatctgatgtgtggtgtagccggagctgacaggaacacc
acggtggaaccaatgtccctctctttatcctcctctttgtaccgttccaccaccgccgcc
ccctccttattcccgccacctgaacaaaccctccaccaacaccaccgtcaatacgttcaa
actcagcaaccagctctctccgccaccgctctacttcaaaaagctgctcaaatgggcgca
acgtcgtcaaacacctcattcctccatgcattaggtttagcaccaccgtcgtcctcctcc
accgaccgctaccaagaagctagcgttagtcaatggagtaatatccaaagcaaacaagag
agaaacgacaacctaatgggtccgccgccaccgaccaccctcgattttcttgggttgggg
atgggtggtggcggctcctccggtgggtactcggcatttttaagttcaatcggaggaagc
agtcttaatgttaattcagccgccggtgttccctttaggggagtcacctccgtccaaaat
gatgattgggatgactccggcgacaagaagccggcgcttcattag
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