Lactuca sativa (garden lettuce): 111913970
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Entry
111913970 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111913970
KO
K18469
TBC1 domain family member 5
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111913970
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111913970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
111913970
NCBI-ProteinID:
XP_023765461
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All DBs
Position
7:complement(82555005..82558800)
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AA seq
773 aa
AA seq
DB search
MSPAALAEPTTNTLPESSETPESSPERGDLDNNRRFWDLRGVQWRTDLGVLPSSSSIDEV
RRVTANSRRSYATLRRRHLIDPLPKDGSNIPDLVMDNPLSQDPDSMWGRFFQKAEIEKMV
DQDLSRLYPEHGSYFQTPGCQGVLRRILLLWCIRHPNHGYRQGMHELLAPLLYVLEADVE
RLSAVRKLYKHYFTDNFDGLSFHNTDSTYTQTSQHTDNNNEIQENQEPINTLDPKIQTII
SFCDPYGAEGELGIVLSQKFMEHDAYCMFDALMSGNGGAVAMSNFFAPPPLSTQLPPVIE
ASSALYHLLAVVDPSLYTHFIELGVEPQYFALRWLRVLFGREFDLEDLLVIWDEIFSFDN
KKLDGVENENDPETSFRVLNSTRGAFIAALAVSMILYIRSSVLSTETATSCLQRLLNFPK
DVNLEKLVKKGKLLVPVAIAAMRSMPPPVDGGGGSGGYKMSKVTTGGKSHSYWEEKWRVL
HKEEEKKVENKPKDWPEKVKVQLLRTESDPSSSKGFREKTIMSPGPGPARIGRHVRRSLL
DDLARQLGLEEEPENCGNGGSEENSSIFSDVASPGGAANDNHHENETDRSSVASNLSVNE
PETETETVTVPEVDSPETVAEVDSPEAVAGDAPVKVEENKDSAGKPGVNLKDRILSSGKL
QWLWKFGKNGGEGSSEKGGGGGGVGGGDQKSEVAVDSGMDVRSKAESREQNKTCSLKNLG
ESMVENLQVIESVFQQEKEVDNMSKKALVDRGQMTAMAALKELRKISNILSEM
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccggcggcccttgccgagccgacaaccaatacattaccggaatcttcagaaacc
cccgagtcgtcaccggagagaggtgatttggataataatcgccgcttttgggacttgaga
ggggttcagtggcgtactgatttgggggttttgccctcttcatcctccatcgatgaagtt
cgtcgtgttactgcaaattcccgtagaagctacgctactttaagaaggaggcacctaatc
gatcctcttcctaaagatggaagcaatattcccgatcttgttatggacaatccattatcg
caagacccagatagcatgtggggtcgcttttttcaaaaagccgagatagagaaaatggtg
gatcaagatttgtcacgattgtatcctgaacatggtagctactttcagactcctggatgc
caaggggtattgagacgaattttgttgctttggtgtattagacatcccaaccatggctat
agacaaggaatgcacgaactcttggctccactattatacgtcctagaagcggatgtagaa
cgtctatccgcagtgcgaaaactatacaaacattacttcaccgataatttcgatggctta
tctttccacaacaccgattcaacatacactcaaacatctcaacacacagacaacaataac
gaaatccaagaaaatcaagaacccatcaataccctcgaccccaaaatccaaacaatcatc
tccttttgcgacccgtatggggccgagggcgaattgggaattgtcttatcccaaaaattc
atggaacacgacgcctattgtatgttcgatgcgttaatgtccggtaacggtggtgcggtt
gcaatgtccaactttttcgcaccgccgcctttgtccacccaattgccgccagtaatcgaa
gcctcctccgccttgtaccacctccttgcggtggttgatccgtctctttacactcatttc
atcgagctcggggttgaaccgcagtatttcgcgcttcggtggttacgggtgttgtttggg
cgggagtttgacctcgaggaccttttggtcatttgggatgaaatattttcatttgataat
aaaaaactcgatggggtggaaaatgaaaacgacccggaaacaagtttccgggtcttgaat
tcgacccgtggggcgtttattgccgcccttgcggtttcgatgattctgtatattcgatcg
tctgttctttccaccgaaaccgccacttcgtgtcttcaaagattattgaattttccaaaa
gatgtgaatttggagaaattggtgaagaaagggaagttgttggttccggtggctattgcc
gccatgagatcgatgccaccgccggtggatggcggcggcggtagcggtggttacaagatg
agcaaagtaacgaccggtggtaagagtcatagctactgggaggagaaatggcgggttttg
cataaagaagaagagaagaaagttgaaaataaaccgaaagattggccagaaaaagtgaaa
gtgcagttgttgagaacggaatccgacccatcttcttctaagggatttcgtgaaaagacg
attatgtccccgggccctggcccggcccggattggacgccatgttcgccggagtttgctc
gatgacttggcccgacagcttggattagaagaggaaccagaaaattgtggaaatggtggc
agtgaagagaactcttcgattttttccgacgtggcaagcccgggtggtgccgccaatgac
aaccaccatgaaaacgagactgaccggagtagtgtggcgtcgaatttatcagtcaatgag
cctgagactgagaccgagactgtgactgtcccggaagttgattcccctgaaactgtcgcg
gaagttgattcgccggaggctgtcgccggagatgctccggtgaaggtggaggagaataaa
gattccgccggaaaaccaggggtgaatttgaaagataggattctttcttcggggaagctt
cagtggctttggaagtttgggaagaatggcggtgagggttcgtcggagaagggcggcggc
ggtggcggtgttggtggtggtgatcagaaaagtgaagtggcggtggattccgggatggat
gttaggagcaaagcggaatccagagagcaaaacaagacatgttctttgaagaatctaggc
gaatccatggtggaaaatctacaggtgattgaatcggtgtttcagcaagaaaaggaagta
gataacatgtcgaagaaggcactggtggatagaggacagatgacagccatggcagctctt
aaagagcttcgtaagattagtaatattttgtcagaaatgtga
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