Lactuca sativa (garden lettuce): 111913998
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Entry
111913998 CDS
T05352
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111913998
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsv01007
]
111913998
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111913998
Enzymes [BR:
lsv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
111913998
Amino acid related enzymes [BR:
lsv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
111913998
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111913998
Prokaryotic type
Other AARSs
111913998
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Spexin
Rrp15p
Motif
Other DBs
NCBI-GeneID:
111913998
NCBI-ProteinID:
XP_023765504
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Position
7:80930578..80935016
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AA seq
614 aa
AA seq
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MADVDATISIDNPVSAPPESDVLSKNARKKELKNKQKEEERRRKEEEKEKKAAAMPKSAV
QKQSAADDEDMDPTQYFENRLKTLATQKAAGMNPYPHKFHVSMSILEYIEKYESLNSGDH
LEDVQVSLAGRLMNKRSSSSKLFFYDLHGTGGKVQVMADARRSDLDEAEFSKYHSGVKRG
DIVGIVGFPGKSKRGELSIFPKTFMVLSHCLHMMPRQKSAAVAENANVKKIDAWTPGSGR
NPDAYILKDQETRYRQRYLDLMLNSEVRHIFKTRAKIVSYIRRFLDNLDFLEVETPMMNM
IAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLERVYEIGKQFRNEGIDLTHNP
EFTTCEFYMAFADYNDLMEITEQLLSGMVKELTGGYKIKYHANGLDSDPIEIDFTPPFRR
IDMIGELEKMANLSIPKDLAGDEANKYLVEACKKFEIKCPPPQTTARLLDKLVGHFLEET
CVNPCFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELANAYTELNDPVVQRQRFADQ
LKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGVDRLAMLLTDSQNIKEVLLFPAMKP
QDEAPVKAAEVVKS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggatgctaccatctcaatcgacaatcctgtgtccgctccaccggagtca
gatgttttaagcaaaaacgctcgcaagaaggagctgaagaacaaacagaaggaggaagag
aggcgtcgcaaggaagaggagaaggagaaaaaggctgctgccatgccaaaatcagctgtc
caaaagcagtcagctgcagatgatgaagacatggatccaacgcaatattttgaaaatcgc
ctgaaaacactcgctactcagaaggcagcaggaatgaacccctacccacacaaattccat
gtctctatgtccattcttgaatacatagaaaagtatgaaagtttaaatagtggagatcat
ctggaggatgttcaagtttctttggctgggcgacttatgaacaaacgatcttcttcatca
aagctcttcttttatgacctccatggcactggtggaaaagtgcaagttatggctgatgca
aggagatctgatttggatgaagctgagttctctaagtaccattctggtgtgaaacgtgga
gatatagttggcattgttgggtttccaggaaaaagcaagagaggtgaactgagcattttt
ccaaaaacattcatggtgctttctcattgtcttcatatgatgccaaggcaaaagagtgca
gctgttgcagagaacgccaatgtgaagaaaatcgatgcttggactccaggaagtggcaga
aatcctgatgcatatattctgaaggatcaggaaacaagatatcgtcaacgttatttggat
ctgatgttaaactcagaagtcagacatatattcaagacccgggcaaagattgtatcttat
attagacgttttcttgataatcttgattttttggaggttgaaactccaatgatgaacatg
attgctggaggggcagctgcaaggccatttgtgacccatcacaatgacctaaacatgagg
ctgtttatgcgtattgcccctgaactttatctaaaggagcttgttgttggtggattggag
cgtgtgtatgagataggaaaacagttcaggaatgaaggaattgatttgacacataatcct
gaattcaccacgtgtgaattttatatggcttttgctgactacaatgacttgatggagata
actgaacaactcttgagtggaatggtgaaggagctaacaggtggatacaaaattaaatat
catgcaaatgggttagatagtgaccccattgaaattgacttcacgcctcctttcagaagg
attgatatgattggagagttggagaagatggcaaatctaagcataccaaaagatcttgcg
ggtgatgaggccaacaaatatcttgttgaggcatgcaaaaagtttgaaatcaaatgtcct
ccacctcaaacaactgcacgtttgctagacaaacttgtgggacactttttggaggaaaca
tgtgtgaacccttgtttcataattaaccatcccgagatcatgagtccattggccaagtgg
cacagatccaaaccaggattgactgaacgtttcgaattgttcatcaacaaacacgagctt
gcgaatgcgtacaccgaactgaatgatccagtggtacaacgccagagatttgctgatcaa
ttaaaggatcgacaatcgggagatgatgaagccatggctttggatgagaccttctgtacg
gctcttgagtatgggttgccaccaactggtggttggggactgggtgttgaccggcttgct
atgttgttgaccgattcacagaacatcaaggaagttttacttttcccagcaatgaaacca
caagacgaagcacctgtcaaagctgcagaagtcgtgaaaagttga
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