Lactuca sativa (garden lettuce): 111914011
Help
Entry
111914011 CDS
T05352
Name
(RefSeq) nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111914011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111914011
03036 Chromosome and associated proteins [BR:
lsv03036
]
111914011
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111914011
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111914011
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
TPR_Nup160_C
HEAT_Nup120
NUP160_helical
Motif
Other DBs
NCBI-GeneID:
111914011
NCBI-ProteinID:
XP_023765518
LinkDB
All DBs
Position
7:80449805..80460361
Genome browser
AA seq
1496 aa
AA seq
DB search
MAARSSFAGMEVPIIGSDSIKWFNIAVPSISTSMPPPPSPEPFAPLTVDVSSCCSIGDPP
TYFIWRIDQSYPNVLEIVEFHSFEEFPRVGLRLEFANALCPFAFICKKEVPTSLENPYML
YALTIAGVAYLIRLTDITNYASCTAFPPSDVVEFSIQNYGDYGAITAISATMGCLVIGGR
TGLVGCFRLGFLDSSDPGFLHELRDDSSFGRLWSLMSRRTIAPVKDLVCLHIQGKRFLLV
LHLDGVLQLWDLLSFSRLLSYTMNASTLEGATFMRLWAGENIHDTSIVPLAVLHKPKPEV
DREVISVYNLHFSLGGKTNYFVEPSTMNISMEGGPLIDVKLSSNKIWILKEQGLVLHNLL
SPRESGEFEQRFCLQETVVAEQLFQTSNHAAYDLLWLAHSLYSSTKDQIAPHVSSVFMRM
LFLPGIFHNSVIRETLQDHNRHFTDSEFHSLTADGLKKEIISLIEHEGVSRNPLSLINCW
RSFCEHYFYNWDKKNAACGLLLDSSSGAIGLIRKSSVSLLRCLEDIELLALGSFDELGES
ASSRINLSNDLEQELLCEVLSCTNSLSQQLGKGTPALFYESFFSEQSMSPEDIVGRFLKV
LETGYTSSIAAVHVSELGVDNAWKKEIDDHKALRKFSVHMFLSLHGLYKKASTWDKVVDV
VLKYLNYLVPQKNEQKLGSEAVFDISTCITVQATSQVAQVMFESAVGILLLLSYMVKLGG
QINMSPDDVSRVQLELFPLIQEIITEWHIIHFFSTTPSESPAIEDFSSQLSLLQIDSSID
RRSWNDKLGKCDFTLAFILLLDHQSFFKDQNRVDSKHLPNPTSFIAPVRNFISRIVWGRS
DDVSSSFSTHSTMLALILLKHGQFDAVEHLLTMVNQNILKEKTSSGIQGVNNEWCTLLHL
LGCCLLSQAHRQAPRGSTEKKVNEAISCFFRAASLQGASKSLQNLSYESGMPHLGISDHV
SPAAWKLHYYQWAMQIFEQYNMSAGACQFALAALEQVDEVLGLKDTYSGADFLNESPNIA
KGRLWANVFKFTLDLSNYHDAYCAIISNPDEESKYICLRRFIIVLYERGATKILCDGQLP
LIGLAEKVEQELAWKAERSDVLVKPNPYKLLYAFEMHQHNWRKAATYMYLHSLQLKNEAT
LKDCQLRSLTLQERLNCLSATINALHLVHPSCAWITPSLQGKSNHKDLYPSKKARITVQD
QEPNDHIPGQKLDSCMDIEKLENEFVLTSAEYLLSLANIKWTFTGIEKPPPNLVELLVQS
NLYDMVFTVILKFFKGSELKRELERVFIAMSLKCCPTRDNFKKQSLLLTSSNNEAVHDSH
DMVSATQYSKGNDQWDALEQYIEKYKSFHPRLPVIVAETLLYADRLIELPLWLVQMFKGK
VKGSWGMSGAESSPASLFQLYVDYGRYPEATNLLLHYIESLASLRPADVVGRKRTSAVWF
PYTTIERLWCKLGDLISSDHMVDQCEKLRSLLQTALLKHFHQLKVDSDDVMASATS
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcggtcatcttttgccggtatggaggttccgataatcggcagcgattctatc
aaatggttcaacatcgctgtcccttcaatctctacttctatgccgcctccaccatcgcct
gagccctttgctcctcttactgtcgacgtatcatcatgctgcagtattggagaccctccc
acctatttcatttggagaatagaccagagttatccaaatgtcttggagatagtcgaattc
catagttttgaagaatttccaagggttggattgcggcttgaattcgctaatgctctatgt
ccatttgcttttatatgcaaaaaagaggtccctacttcacttgagaacccatacatgctt
tatgcattgacaattgctggagttgcataccttattagactgactgatataactaactat
gcatcatgcactgctttcccaccaagtgatgttgttgagttttctattcaaaattatggt
gattatggagcaattacagccatatcagcaaccatggggtgtcttgtaataggtggaagg
actggattggttggttgtttccgacttggctttcttgattctagtgatccaggttttctg
catgaactacgagatgattccagttttggtcgattgtggagtttaatgtcgaggaggacc
atagctcctgtgaaggatctggtatgtttacatattcaagggaaaaggtttctccttgtg
ctacatttagatggagttttacaattgtgggaccttttgagctttagcagacttctgagt
tataccatgaatgcttccacattggaaggagctacattcatgaggttatgggcaggagaa
aatatccatgatacaagtatagtacctcttgcagttctgcataagcctaagccggaagtt
gatagagaggtgatatctgtatacaatttgcattttagtctgggagggaagactaattat
tttgttgagccttcaacaatgaacatttccatggaagggggtccactcattgatgtcaaa
ctttcttcaaataaaatttggatactcaaagaacagggactggttttgcacaacttgtta
agtccacgtgagagtggggaattcgagcaacgcttttgcttacaggaaacagttgttgct
gaacaactatttcaaacttctaaccatgctgcatatgatcttctttggcttgctcattca
ctatattcatccacaaaggaccaaattgcccctcatgtgtcttcagtcttcatgcgtatg
ctatttcttccaggcattttccataattctgttatccgagaaacactacaagatcataac
agacacttcactgattctgagtttcactctttaactgctgatggactaaaaaaggagatt
atttctctaattgagcatgagggtgtttccaggaatccactttcacttataaactgctgg
agaagcttctgtgaacactatttttacaattgggataagaagaatgcagcatgtggatta
cttcttgattcatcaagtggtgccattggtttaataagaaaatcatcagtttctctattg
cgttgtttggaggatatagagcttcttgcccttggatcttttgatgaacttggtgaatct
gcaagctcaaggatcaacttatcaaatgatcttgaacaggaattactttgtgaggttttg
tcatgcacaaatagtcttagccaacagctaggaaaaggcacccctgctttattttacgaa
tctttcttcagtgaacaatctatgtcccctgaagacattgttggacgtttcttgaaggtt
ctagaaaccggatacacttcttcaatagcagctgttcatgtctcagagttaggtgttgat
aatgcttggaaaaaggaaattgatgaccacaaagcattaaggaagttctctgtgcatatg
ttcttatctcttcatggtctctacaaaaaagcttcaacatgggacaaagttgtagatgtt
gtattgaaatacttgaactatttagtgcctcaaaagaatgaacagaaattgggttctgaa
gctgtttttgatattagtacttgcataacagttcaagcaacttcacaagttgctcaagtg
atgtttgaatctgcagtggggatactattgctgctgagctacatggtgaagttgggtggc
cagataaatatgtcacctgatgatgtttccagggtgcaactcgaattatttccattgatc
caagaaattattactgagtggcatataatacatttcttctcaaccacaccttctgaatca
cctgccatagaagatttcagttctcaactctctttattacaaattgatagcagcattgat
cgaagatcatggaatgacaagcttggaaaatgtgactttacattggcttttattctgttg
cttgatcatcaaagttttttcaaagatcaaaaccgtgttgattcaaaacaccttccaaat
cccacctctttcattgctccagtaagaaacttcataagccggatagtttggggaaggagt
gatgacgtgtcatcttctttttctactcactcaactatgcttgctttgatcttgcttaaa
catgggcagtttgatgctgttgagcatcttcttactatggtgaaccaaaatatactgaag
gagaaaacatctagtggtattcagggtgtaaacaatgaatggtgcacacttcttcacctt
cttggctgttgtcttctttcacaagcacatcgtcaagcaccacggggttctactgaaaag
aaagttaatgaagctatttcttgcttttttagagctgcatctttgcaaggggcatcaaag
tcattgcagaatttatcatatgaatccggaatgcctcaccttggcatctctgatcacgtc
tcccctgcagcatggaaacttcattactatcaatgggcaatgcagatatttgagcaatat
aatatgagcgcaggagcatgccaatttgcccttgctgcacttgaacaagttgatgaagtt
ttgggccttaaagacacttattcaggggcagattttctcaacgaatctccaaatattgct
aaaggaagactttgggccaatgtattcaagtttacacttgatttgagcaattaccatgat
gcttattgtgccattatttcaaatccagatgaagaaagcaaatacatctgcttgaggcgt
tttatcatcgttctttatgagcgtggtgcaactaagattctttgtgatggccaattacca
ttaattggtttagctgagaaagtagagcaggagcttgcttggaaggcagagcgttcagat
gttttggtgaaaccaaacccttataaattactatatgcctttgaaatgcatcagcataat
tggcgtaaggctgcaacttatatgtatcttcattcacttcaactgaaaaatgaagcaact
ttaaaagattgccagctcagatcattgactttacaagaaagactgaattgtctttctgcc
actataaatgcacttcatcttgtccatccatcgtgtgcatggatcactccttcacttcaa
gggaagtctaatcataaagacttatatccaagtaaaaaggcgagaattacagttcaagat
caggaacctaatgatcatatccctggtcagaaactggattcttgtatggatattgagaaa
cttgaaaatgagtttgtgctgacatcagcggagtatttgctttcgttggcaaatattaaa
tggacatttactgggattgagaaacctccaccaaacttggttgagttgttggttcagtca
aatctatatgatatggttttcacagtaattcttaaattctttaagggttcagaattaaag
agggaactggaaagagtttttattgccatgtcactcaaatgctgtcctaccagggataat
tttaaaaagcagagtctgcttctgacatcatcaaacaacgaggctgttcatgattctcat
gacatggtttctgcaacacaatattcaaagggaaatgaccagtgggatgcacttgagcaa
tacatagaaaaatataaaagttttcatccaagattgccagttattgttgcagaaaccctt
ctatatgctgatcgactgattgaactccctctttggcttgtccagatgttcaaggggaaa
gtgaagggaagttggggcatgtctggggctgaatcaagccctgcatcattgttccaactt
tatgttgattatgggagatatccagaggctactaatctcctgcttcattatattgaatcc
cttgcatcactgagaccagctgatgttgttggtaggaagagaacatctgcagtctggttt
ccatacacaacaatcgaacggttgtggtgtaagcttggggacttaatcagttcagaccat
atggttgatcaatgtgaaaagctaagaagcctcttacaaacagctctactcaagcacttt
catcagctaaaagtggattcagacgatgtgatggcctctgcaacctcttaa
DBGET
integrated database retrieval system
