Lactuca sativa (garden lettuce): 111914025
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Entry
111914025 CDS
T05352
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00541
Biosynthesis of various nucleotide sugars
lsv01100
Metabolic pathways
lsv01250
Biosynthesis of nucleotide sugars
Module
lsv_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
111914025
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
111914025
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
NAD_binding_10
Motif
Other DBs
NCBI-GeneID:
111914025
NCBI-ProteinID:
XP_023765542
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Position
7:complement(183432664..183435245)
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AA seq
743 aa
AA seq
DB search
MVARCEFLTLTQSTCNVYVYLSSGIGFYSVKLSAVSFFIILVEICFSPLSCVHIHIYTDS
SCHMTMYTPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNFKNLNPSKSSP
NFKFVKGDIGSADLVNHILITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIGGTHVLLEA
CKVTRQIRRFIHVSTDEVYGETEKDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY
GLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGNPLPIHGDGSNVRSYLYCEDVAEAFEV
ILHKGEVGHVYNIGTKKERRVIDVAKDMCTLFNMDPESSIKFVENRPFNDQRYFLDEEKL
KSLGWAERTTWEEGLKKTMEWYISNPDWWGDVSGALLPHPRMLMMPGGVERVVDVSENIQ
SDSPHAAVNASQFRKVGPVAKTSKPSFKFLIYGKTGWIGGLLGKLCEKQGIGYEYGKGRL
ENRSQIVEDVQKIKPTHVFNAAGITGRPNVDWCESHKTETIRTNVSGTLTLADVCKESGI
LMINFATGCIFEYDEKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLREYDNVCTLRV
RMPISSDLNNPRNFITKIARYDKVVNIPNSMTILDELLPLSIEMAKRNLRGIWNFTNPGV
VSHNEVLEMYKEYINPGFKWTNFTLEEQALVIVAARSNNELDVTKLKKEFPELLSIKESL
IKYVFGPNKKEIKMCNNGYTMPT
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaaggtgtgagtttttaacactcacacaatccacctgtaatgtgtatgtatat
ttaagctcaggcatcggcttctactcagtaaaattgtccgcggtttctttcttcataatt
ttggtggaaatctgtttttcacccctctcttgtgttcatattcatatttataccgatagc
tcctgccatatgacgatgtacacaccaaagaacatcctcatcaccggagctgctggattc
atcgcctctcatgttgccaatcgccttgtcagaagctacccagattacaagatcgttgtt
cttgacaaacttgattactgctcaaatttcaagaacctcaacccctccaaatcatctccc
aacttcaaatttgtcaaaggagacatcgggagtgcagatctagtcaatcacatcctgatc
accgaatccattgataccataatgcattttgcggctcaaacccatgtagataactcattc
ggaaatagcttcgagttcacaaaaaacaacatcggtggcacccatgttcttcttgaggca
tgcaaagtcactcgccagatccgaaggttcatccatgtcagcacagacgaagtgtatggt
gaaacagagaaggacgcggtagttggcaaccatgaagcttcgcaacttcttcccacaaat
ccatattctgccacaaaagcaggtgcagaaatgcttgtgatggcttatggtagatcatat
gggttacccgtgattacaacaagaggaaacaacgtttatggcccaaatcagtttccagaa
aaattaatccctaaattcattcttttagccatgagagggaacccacttcccattcatgga
gatggatctaatgtcagaagttatctctactgtgaagatgttgctgaagcttttgaagtc
attcttcacaaaggtgaagtgggacatgtttacaacattggaaccaaaaaagaaaggcga
gtcattgatgttgctaaagacatgtgtacacttttcaatatggatcctgaatcaagcatc
aagtttgttgaaaacaggcctttcaatgatcaaagatactttctagatgaagaaaaactc
aaaagcttaggctgggccgaaagaacaacatgggaagaaggtttgaaaaagacaatggaa
tggtacattagcaaccccgattggtggggtgatgtatcaggtgcactccttcctcatcca
agaatgctaatgatgccaggtggcgttgaacgagtggtcgatgtatccgaaaacatccaa
tcggattcccctcatgctgctgttaacgcttcccaattccgaaaagtgggccccgttgca
aaaacgagtaaaccatctttcaagttcttgatttatgggaaaacaggatggatcggtgga
ttacttgggaagctatgtgaaaaacaaggaatcggatatgaatacggaaaagggcgtttg
gagaatcggtcacaaattgtagaagatgtccaaaaaatcaaacccacccatgttttcaat
gctgcgggtatcacgggtcgacccaatgtggattggtgtgaatcgcataaaaccgaaacg
atacgcaccaatgtctctgggacccttactttagcagatgtctgcaaagaatccggaatc
ttgatgatcaatttcgccaccggatgcatttttgaatacgatgagaagcatccggaaggt
tccggaatcggtttcaaagaagaagacactcctaatttcaccggatccttctattccaaa
accaaggccatggttgaggagctactaagagaatatgacaatgtgtgcacattgcgggtc
cggatgccgatttcatcggatctaaacaacccgcgaaacttcattacgaaaatcgcgcga
tacgacaaagtggtgaatattccaaacagtatgacgattttggatgagcttttaccgcta
tcgattgaaatggcgaagagaaacttgagggggatatggaattttacaaatccgggggtt
gtgagtcataatgaagtattggagatgtataaggaatatataaatccggggtttaagtgg
acgaattttacgcttgaagagcaagcgctggtgattgttgcagcaaggagtaataatgag
ttggatgtgacgaaattgaagaaagagtttccggaattgctatcgattaaggagtcgttg
atcaagtacgtgtttgggccgaataaaaaagaaattaagatgtgcaataatggatacaca
atgccaacttag
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