Lactuca sativa (garden lettuce): 111914058
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Entry
111914058 CDS
T05352
Symbol
CNGC18
Name
(RefSeq) cyclic nucleotide-gated channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111914058 (CNGC18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111914058 (CNGC18)
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111914058 (CNGC18)
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
111914058
NCBI-ProteinID:
XP_023765568
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All DBs
Position
4:401834944..401838444
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AA seq
678 aa
AA seq
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MMNRVLTTPATRLRQQFTRPTSNTIATDKANSATFWHYQILDPNGEAVTRWYQFFLVVCL
VSLFIDPLYFYLPYVGGDTCMTKDHAAAIAINTWRSFADIFFVVHIVMKFRTAFIAPSSK
VFGRGELVMDKRQIARRYLKSDFVIDVAAMLPLPQIVHKLIIPATNKNTKDHANNTLSLI
VLIQYIPRLFVIFPLNQRIIKSTGFVAKTAWAGAAYNLLLYMLASHVLGATWYSMSIGRQ
HSCWQQGCKEEMAEKVCMSFLDCKSIDNPDRKKWLESTSLRTLCDASNESSPFKFGMFAD
AFTSEVASSKFFEKYLYCLWWGLRNLSSYGQNLDTSIYIGETLFCIFICIGGLILFAQLI
GNMQTYLQSMTLRLEEWRIKRRDTEEWMRHRQLPEELADRIRRFVQYKWLATRGVDEEYI
LQSLPIDLRREIQRHLCLNLVRRVPFFSQMDDNLLDAICERLVSSLSTQGTYIVREDDPV
NEMLFIIRGQLESSTTDGGRSGFFNSITLRPGDFCGEELLTWALLPNATSYPSSTRSVRT
LTEVEGFALRAEDLKFVANQFKYLHSKKLQHAFRYYSHQWRTWGAALIQATWRKYKRRKL
AKELALQELMEGFYYEESGTDGTPGSSSEQQFGVGATVLASRFATNTRKGIGHHKVGSVD
SSTSLKMPQLFKPDEPRF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgggtgctgacaacgcctgccacccgtctccgccaacaatttacgcggccg
acgtcgaatacaattgccacagataaagctaacagcgcgacgttttggcattaccagatc
ctcgatccaaacggagaagctgtgactcgatggtaccaatttttcctcgtggtgtgcctc
gtctctctcttcatcgatcccctttatttctaccttccatacgtcggcggagacacctgc
atgaccaaagatcacgccgccgcgatcgccatcaatacctggcgttcatttgcagatatt
ttcttcgtcgttcacatcgtcatgaagtttcgcactgcgtttattgctccaagctctaag
gttttcggcagaggcgaactcgttatggacaagcgtcagattgctcggcgatatttgaag
tctgatttcgtaattgatgtcgctgctatgcttccattaccccagatagttcacaagctg
atcataccagcaacaaataagaacaccaaagatcatgctaacaatacactatcactcatc
gttctgattcagtacatccctcgattgtttgtgatttttccactaaatcagcggattata
aaatctacagggtttgtagctaagacagcttgggcaggagctgcttacaatcttctactt
tacatgcttgctagtcatgtccttggggctacatggtattcgatgtctatagggagacag
cattcatgttggcaacaagggtgtaaagaggagatggctgaaaaagtttgtatgagtttt
ttggattgtaaaagcattgataatccagatcgcaagaaatggcttgaatccacaagtctg
agaactctatgtgatgctagcaatgaatcttctccttttaaatttggaatgtttgcagat
gctttcacaagcgaagttgcttcttccaagttcttcgagaagtatttatattgcctttgg
tggggtttgagaaatttgagttcatatggacagaatctggacacgagcatctatatagga
gagacgttgttctgcatcttcatatgtatcggaggcttgattctattcgcacaattgata
ggaaacatgcagacgtatttgcaatcgatgacgttaagactggaagagtggaggattaaa
agaagagacacggaggagtggatgagacaccgacagttaccggaggaattagcagacaga
atccggcgatttgttcagtataaatggctggcgacgagaggcgtcgatgaagaatatatt
ctccagtctttacccatcgatctccgccgtgaaatccaacgccacctctgccttaacctt
gttcgacgagtcccattcttctcacaaatggacgacaaccttctggacgcgatctgtgaa
cgcctggtgtcatccctaagcacacagggcacatacattgttcgcgaagatgatccagta
aatgagatgttgttcataatccgcggacaactagaatcctcaacaacagacggcggaaga
tctggattcttcaattcaatcaccctccgacccggcgacttttgtggcgaagagctacta
acgtgggccctactccccaacgccacaagctacccttcctccacaagatctgttcgaacc
ctaaccgaagtcgaaggctttgcgttacgcgccgaagatttaaaattcgtcgcgaatcag
ttcaaatacctccacagtaaaaaactccaacacgcgttccggtattattcccatcaatgg
cggacatggggcgcagctttaattcaagcaacatggcgcaaatataaaagaagaaagctc
gcaaaggaattggctcttcaggagttgatggaagggttttattatgaggagtcgggcacc
gatggtactccaggcagcagcagcgagcagcagtttggggttggggcgactgttttggcg
tcgaggtttgctacgaatacgagaaaaggaatcggtcatcacaaagttggttctgttgat
tcgtctacgagtcttaaaatgcctcaattgtttaaaccggatgagcctaggttttga
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