KEGG   Lactuca sativa (garden lettuce): 111914161
Entry
111914161         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111914161
  KO
K11797  PH-interacting protein
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111914161
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111914161
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_EML WD40_MABP1-WDR62_2nd WDR55 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Bromodomain Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Auxin_resp VPS8_N Beta-prop_HPS5 Caps_syn_GfcC_N Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th WD_LRWD1
Other DBs
NCBI-GeneID: 111914161
NCBI-ProteinID: XP_023765681
LinkDB
Position
6:complement(202235957..202246437)
AA seq 1609 aa
MALHKNVPPNEPASGSLKSLTFSGKVKERGQLVEMDNKRGNEGEADIDLREVYFLIMHFL
SAGPCHRTYGQFWNELLEHQLLPRRYHAWYSRTGATSGDEDDDGKSFPLSYNKLVERYPH
IEKDHLVKLLKQLLSGAASSSSSSSQGIIVNTPLNAAAVPTLLGTGSFSLLNGDVKNKEV
KRGPPGFMRWPHMQADQVRGLGLREIGGGFARHHRAPSIRAASYAIVKPSTMVQKMENLK
KLRGHRNAVYCAIFDRLGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSFNN
ALVASASNDCIIRVWRLADGLPISVLRGHTGAVTAIAFSPRLGSVYQLLSSSDDGSCRIW
DARHSQFSPRIYIPKPPEPQPGKSNGPSTSNFVPQSHQIFCCAFNASGTVFVTGSSDTFA
RVWNACKPSNDDPEQPNHEMDILAGHENDVNYVQFSGCAVASRFSLSDASKEENLPKFKN
TWFTHDNIVTCSRDGSAIIWVPKSRRSHGRVGRWTRAYHLKVPPPPMPPQPPRGGPRQRI
LPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSESTYVLDVHPFNPR
IAMSAGYDGKTIVWDIWEGLPIRIFEIGRFKLVDGKFSPDGTSIILSDEVGQLYILSTGQ
GEAQNDAKYDQFFLGDYRPLVQDAHGNVLDQETQLAPYRRNMQDLLCDSGMIPYPEPYQS
TYQQRRLGALGFEWRPSSVRFAVGTDISLDQEYQVPPIADLDILMDPLPEFLDAMDWEPE
IEVQSDENDSEYNVTEEYRSGGEQGSLSSNASGSLECSGGDTEDQSDTTSIRRSKKKKIK
AEVEFMTSSGRRVKRRNLDGEETAIRNNRSRKSRFGQKASKKKSSQSKSSRPRRVAARNA
LSFLSRISGKASEGEEEDEEEEEEEEGGDSYESYSSQQETEAGSEETEMSFENDQNGHSK
GKEIASEDTGIPQESPEPRIPTGKRRLVFKLPRKRLVLENKIDDVAGPSSIDELSKDFIG
NGEFESNENGLSMQNMNHLSLLEGYKDGDIKWGGAKSRSSKRSRISEPIAKSSPCPEGNF
VNEEPTFENKEEFTVPTSPFDVQIEKGKMVKSEQDNETHILMPTKFRIKSSVLLKDQDSP
TKLTIRSSVQESRNGGEGTMLSDDSTSDLPETKLTNSEDIQETQKPDSRDKMFKEVYRRS
KSTRTRANSSINGEASTSNTDNQNERIEPRIHGTRRNVNLRVVDDVDVSEDTSSKEKYST
DGGDEGRLNSRHTVGLRSTRTRRSVDYNRKNRSPEKKKTHQLTRSSWLMLSTHEEGSRYI
PQLGDEVVYFRQGHKEYIEGSNSREMVPWRSLKGNIRDVEFCKVKDLEYSTRPGSGEGCC
KMTLQFEDQSSNVAGKSFKLTLPEVTGFPDFLVERSRYDAAMERDWRCRDKCQVWWKNEG
DENTGEWWNGRIVGVKAKDAEFPDSPWERFSVQYKGDTEILLHSPWELYDAAANVLEEPR
IDDHVRNKLIRALAKLEQSGNKSSEDHYGVQKLRQVSQSSTFINRFPVPLTLDVIQSRLE
NNYYRRFAAMKHDVEVLLENAEIYFGRNKDNSMKMRRLSDWFTRTLSSL
NT seq 4830 nt   +upstreamnt  +downstreamnt
atggctcttcacaagaatgttcctcccaatgaaccagctagtgggagtttaaagtcgttg
actttttctggaaaggtgaaggagagaggtcaacttgttgagatggataataaaagagga
aatgaaggtgaagcagatattgaccttcgagaggtttattttttgattatgcatttcttg
tcagctgggccatgtcatcggacatatggtcagttttggaatgagcttcttgagcatcag
ttgttgcctagaagatatcatgcttggtattcaagaactggtgctacaagtggagatgaa
gatgatgatggcaagtctttccctttgagctacaataagttggtggaaaggtatcctcac
atagagaaggatcacttagtgaagctgttgaagcaactgttaagtggtgcagcttcatca
tcatcatcatcatcacagggcatcattgtaaatactccattgaatgctgctgctgtccct
actcttttgggcactggctccttttcacttttgaatggtgatgtgaagaataaggaagtg
aaacggggcccaccagggttcatgaggtggcctcatatgcaagcggatcaagtgcgtggg
cttgggctgagggaaattggtggaggctttgcaaggcatcaccgggccccatccatcagg
gcagcttcttatgccattgtcaagccatccaccatggttcaaaagatggagaatcttaag
aagcttagaggccatagaaatgctgtctattgtgcaatatttgatcgattagggagatat
gtgattactggttcggatgatcggcttgtaaaaatctggtcaatggaaactgcatattgc
ttagccagttgtcgtggacacgaaggtgacattacagaccttgctgtgagcttcaacaat
gcactggttgcttctgcttcaaatgactgcattattcgagtttggaggctagcagatggg
cttccgatttcagtcttacgaggtcacacaggggcagttacagcaattgcctttagtcct
aggctgggctccgtttatcagctattgtcgtcgtctgatgatggatcatgtaggatttgg
gatgctaggcattctcaattcagtccaagaatatacattcctaagcctcctgaacctcaa
cctgggaaaagcaatggcccatcaacatcaaattttgttcctcaaagtcatcagatattt
tgctgtgcattcaatgctagtggaactgtttttgtcactggaagctcagacacttttgca
agggtttggaatgcgtgtaaacctagcaatgatgatccggagcaacccaatcatgagatg
gatattttagctgggcatgaaaatgatgttaattatgtacaatttagtggctgtgctgtg
gcttctagattttctctatctgatgcttctaaagaagaaaaccttccgaaattcaagaat
acatggtttacccatgacaacattgtgacttgttcccgagatggaagtgcaattatttgg
gttccaaaatcacgtagatctcatggaagagttggaaggtggacacgagcgtatcacctg
aaagttcctccaccaccaatgccaccacaaccaccacgaggaggtccccggcaaaggatt
ctgccgacaccacgtggtgttaatatgattgtctggagccttgacaaccgttttgtcctt
gctgccatcatggattgcagaatatgtgtctggaatgctgttgatggtagcttagtccat
tctttaactggtcacagtgaatctacttatgttttggatgttcatccttttaatccacga
atagctatgagtgctggatatgatggaaaaacaatagtgtgggatatttgggaaggattg
cctattcgtatatttgaaatcggacgcttcaagctagttgatggaaaattctctccggat
gggacatccattatactgtctgatgaggttggtcagttatatatattaagcactggccaa
ggagaggcacaaaatgatgcaaagtatgatcagttttttcttggagattacaggccactt
gtccaagacgcacatggaaatgttcttgaccaagaaacacaacttgctccctatcgaagg
aatatgcaagatctcctttgtgattcaggcatgattccatacccggagccttaccaaagc
acataccaacaaaggcggttaggagctctagggtttgaatggaggccatcctctgtgagg
tttgctgtaggaaccgacatcagtcttgaccaagagtaccaggtcccaccaattgctgac
ctggatatcttaatggacccacttccagaatttcttgatgccatggattgggaaccagag
atagaagtacaaagtgatgaaaatgattctgagtataatgtgaccgaggagtatcggtca
ggaggagaacaaggaagtttgagttcaaatgcttcgggcagcttggaatgcagtggtgga
gatacagaggatcaaagcgacactactagtatccgtaggtctaaaaagaaaaagatcaag
gcagaagttgagttcatgacatcttcagggagacgtgtgaaaaggaggaatttagatggt
gaagagactgcaatcagaaacaatcgaagcagaaagtcaagattcggtcaaaaagcttct
aaaaagaagtcgtctcagtccaaatcttcaaggccaagaagggtagctgcccgaaatgcc
ctaagttttctttcccgaataagcggaaaagcctccgagggagaagaagaagatgaagaa
gaggaagaagaagaagaaggcggcgattcatacgaaagctattcaagtcagcaagaaacc
gaagccggaagtgaagaaactgaaatgtcgttcgaaaatgaccaaaacggacattcaaaa
ggtaaagaaatcgcatccgaagacacgggtattccccaagaaagtccggaaccgcgtatt
ccgactggaaaaagacgattggtgttcaaacttccgagaaagcggttggttttagagaac
aagatagatgatgttgcgggcccgtcttcgatagatgaattgagtaaggattttatagga
aatggcgaatttgaaagtaatgaaaacggtttatcgatgcaaaacatgaatcatttaagc
cttcttgaaggatataaagatggagatattaaatggggaggggcaaaatcccgttcatca
aaacgttcaagaatctctgaaccaattgctaaatcatcgccatgccccgagggcaatttc
gtcaatgaagaaccgacattcgaaaacaaggaggagttcacggttcccacaagtcctttc
gatgtccaaattgaaaagggcaaaatggtcaagtccgagcaggataatgagacccatatc
ctgatgccgacaaagtttagaataaagtcaagtgtgcttttaaaagaccaagattctcca
acaaaactaacgattagatcatcggtacaagaatcaagaaacggaggagaaggtacaatg
ttgtctgacgactcaacctcggatcttccggaaacaaagttaacaaattcagaggatatt
caagagacccaaaagcccgattcgcgggataagatgtttaaagaagtttacagacggtca
aagtcaaccaggacaagggcaaattcgtcaattaacggtgaagcaagtacatctaacaca
gacaatcaaaacgaaagaatcgagccccgaatccatgggacacgtaggaatgtgaatttg
agggttgtagatgatgtggatgtttctgaagacacttcaagtaaagaaaagtattccacg
gatggaggtgatgagggtaggttgaattcaagacataccgttggattaagatcgacacga
acgagaagaagcgttgattataatcggaaaaataggtcaccagagaaaaagaaaacacat
cagttaacaagaagctcatggttgatgctttcgactcatgaggaggggtcccgctatatt
cctcagcttggggatgaagtagtatacttcagacagggtcataaagaatacattgagggt
agcaattcaagagagatggttccatggagatcactgaagggaaacataagagacgtggag
ttttgtaaagtcaaagatctggaatactcaacacgtcctggatccggtgaaggctgctgc
aaaatgaccctgcagtttgaggaccagtcttccaatgttgctggaaaatccttcaagctg
actcttccggaagttaccggattccctgactttctagttgaaagaagcaggtatgatgct
gcaatggagagggactggaggtgtcgcgacaaatgccaggtgtggtggaaaaacgaaggg
gacgaaaacactggggagtggtggaatgggaggattgtgggggtgaaggctaaagatgct
gagtttcctgatagtccatgggagaggttttctgttcagtataaaggcgacactgaaatc
cttctgcatagtccttgggagctttatgatgctgctgctaatgtgttggaggagccacgt
attgatgatcatgttagaaataagcttatccgtgctttggctaaactcgaacaatcagga
aacaaatcttctgaggatcattatggtgttcagaaattgagacaagtatctcagtcatca
acatttatcaacaggtttccggtgcctttgacacttgatgtaatccaatcgagactagag
aacaattactacagaagatttgcagcaatgaaacatgatgtggaggtgttgttagagaac
gccgagatttactttgggagaaataaagataactcaatgaagatgagacgtttatcagac
tggtttacaaggacactttcgtctttgtag

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