Lactuca sativa (garden lettuce): 111914204
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Entry
111914204 CDS
T05352
Name
(RefSeq) novel plant SNARE 13
KO
K08494
novel plant SNARE
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111914204
Membrane trafficking [BR:
lsv04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
111914204
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
Helo_like_N
GCIP_C
DUF5601
ABC2_membrane_3
TMPIT
Motif
Other DBs
NCBI-GeneID:
111914204
NCBI-ProteinID:
XP_023765752
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All DBs
Position
6:complement(205725565..205728695)
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AA seq
273 aa
AA seq
DB search
MANPDLQMNVQMEQIHGEIRDNFRALATGFQKLDKIKDSSRQSKQLEDLTGKMRECKRLI
KEFDREIKEEESKNPPEVSKKLNDEKQSMIKELNSYVALRKTYQSTLGNKRVELFDMGAG
GSEPMADENAQVASEMSNQELVQAGMQTMNETDQAIERSKQVVQQTVEVGTQTAANLKGQ
TDQMGRIVNELDTIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNP
NNKDIKDIPGLAPPAPASRRLLYVRRFAEEDHF
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatccggatttgcaaatgaacgttcaaatggagcagatccatggagaaattcgt
gacaattttcgagccctcgcaactgggtttcagaaactggacaagattaaagactccagc
agacaaagtaaacaattggaggatcttacaggaaagatgagagagtgtaaaaggttgatc
aaagagtttgaccgtgaaatcaaagaggaggaaagtaaaaatcctccagaagtcagcaag
aaactcaatgacgagaagcaatcgatgatcaaagagttaaactcatatgtggccttgaga
aagacataccaaagcactcttggaaataaaagggttgaactttttgacatgggagcaggt
ggtagtgagcccatggctgatgagaatgctcaggtggcatcagaaatgtcgaatcaagag
cttgttcaagctggcatgcagacaatgaatgagactgatcaggccatcgaacgatccaaa
caggttgttcaacaaacagttgaagtgggaacccaaactgctgctaatttgaaaggccaa
actgatcaaatgggtcgaatcgtgaatgaacttgacacgattcaattctcaattaaaaag
gcatctcagcttgtgaaggagataggacgacaggtggcaacggataaatgcatcatgcta
tttctatttcttatcgtgtgtggggtgattgctattattgtcgtgaagattgtgaatccc
aacaacaaagacataaaagatataccggggttggctcctccggctcctgcttcaaggaga
ttattgtatgtaaggaggtttgcagaagaagaccatttttga
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