KEGG   Lactuca sativa (garden lettuce): 111914213
Entry
111914213         CDS       T05352                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03082  ATP-dependent chromatin remodeling
lsv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111914213
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111914213
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsv01009]
    111914213
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111914213
   03036 Chromosome and associated proteins [BR:lsv03036]
    111914213
Protein phosphatases and associated proteins [BR:lsv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111914213
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     111914213
    SWI/SNF complex
     111914213
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    111914213
   PBAF complex
    111914213
   SWI/SNF complex
    111914213
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 111914213
NCBI-ProteinID: XP_023765761
LinkDB
Position
6:complement(206631718..206634857)
AA seq 242 aa
MKPHPAWSSSKNPVKFRIPTAENLIPIRLDVDIDGQRFRDTFTWNPSDPDSDVILFAKRT
VKDLKLPPAFVTQIAQSIQSQLTEFRSFEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWL
NQFQDLNNFDSDPEEFARIICEDLGIQDPEVGPAIAFAIREQLCEIAIQSVASARETRIN
KKGRRGTEHLPLSKPGGTALDTMKLFGNKSSVIRKRREWDLYEPIVDLLSNEEVDALEAR
ES
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaagccgcatccagcttggagttcgtcgaaaaacccagttaagttcagaattccaact
gctgaaaatcttattcccattcggcttgatgttgatatagatggtcagaggttcagggat
acattcacttggaacccttctgatccagattctgatgtaattttgtttgcaaaacggaca
gtgaaagacctcaagcttcctccagcatttgtaacccaaattgctcaatccattcaatca
cagcttactgaatttcgatcatttgaagggcaagatatgtacacaggcgagaaaattgtc
cctattaagcttgatcttcgagtgaatcatacattgataaaggaccaatttttatggttg
aaccaatttcaggacttgaataactttgatagtgaccctgaagaatttgcaagaattatc
tgtgaagatttgggtatccaagaccctgaagttggacctgcaattgcgtttgcaattagg
gaacaactttgtgagattgcaatccagagtgtagcttcagcaagggaaacaagaataaac
aaaaaaggacgaaggggcactgaacatctgcctctcagtaagccaggtggaactgcgttg
gacacgatgaagttatttggtaacaaatcaagtgtgatcaggaaaagaagggagtgggac
ttatatgaacccatagtggatcttttgtccaatgaggaagttgatgccctagaggctaga
gaatcatga

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