Lactuca sativa (garden lettuce): 111914652
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Entry
111914652 CDS
T05352
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111914652
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111914652
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
Methyltransf_25
Ubie_methyltran
RsmF-B_ferredox
PCMT
Motif
Other DBs
NCBI-GeneID:
111914652
NCBI-ProteinID:
XP_023766117
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Position
4:complement(43294017..43297239)
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AA seq
586 aa
AA seq
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MKGVRVLLRAINRNRSFSSRTTPSQSQSQSQSQILLMDSSERYCYNPTLRWNPQVEEYFT
NAYGAEVFSRISKALTRPSCYSCIRVNTLNTTTEAVIEKILEIQCDKRLQDTVKNGDIES
LSVLKCQIPGLDYVVFVKGSGPHDIQYDYQQDRPPKEIIVSRKCAEAVLRGAQVYVPGIL
ACSAHVEKGDLVAVSVGVEQPSRDNGWAIGITRGIVLQGLKTDPQYLERDGLYIGQGTTT
MSRAGIFRGLSGLGVDMTERVFRLTSFNDVMKGDIFLQNLPSIITAHVLDPQEGERILDM
CAAPGGKTTAIASLMKDKGEVIAVDRSHNKVLEIHNLAAELGLTSIKAYKLDALKAVCEN
NLVTQSCGQSQASEEAESMSCVTKDLPILEKVNNNNNREDEGMKVGCYKSKAEERKERRR
MKNGPGRNQSTGGRVDKCEGFLSNSFDRVLLDAPCSALGLRPRLFAGEDTVESLRRHGKY
QKRLFDQAVQLVRPGGVLVYSTCTINPGENEALVRYALDTYKFLSLAQQDPRIGGPGLVG
HCELSNGYFEEWLRAGEEDLVQRFDPSGPHDTIGFFIAKFTVGPKD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagtgagggttcttctgagagctattaacagaaaccgaagcttcagcagtcga
acaacaccctctcaatcgcagtcccagtcacagtctcagatcctgctgatggattcatct
gaacgttactgctacaaccccacgttacgctggaatcctcaagtggaagagtatttcacc
aatgcttatggagcagaagtcttttctcgcatttccaaagcactaacgcgtccctcttgc
tactcttgtatacgtgtaaacacactgaacacaacaactgaagctgtcattgagaagatt
ctggaaattcaatgcgataagaggctgcaagatactgtaaagaatggtgatatagaatcc
ctaagtgttttaaagtgtcaaatacctgggctagactatgttgtatttgtgaaaggttca
ggcccacatgatattcagtatgattatcagcaagacagacctcctaaggagataattgtc
agccgtaagtgtgcagaggcagttcttcgaggtgctcaggtatatgttccaggtatatta
gcatgcagtgctcatgttgagaaaggggatttagttgcagtttcagttggtgttgaacag
cctagtcgtgacaatggatgggctattggaatcacacgtggcattgtccttcaaggactc
aaaacagatcctcaatatcttgaaagagatggattatatattggtcaaggaaccacaacc
atgtcaagggcaggaatttttcgtggattatcaggtcttggtgtggatatgactgaaaga
gtttttagattaacatcctttaatgatgtgatgaagggggacatatttcttcaaaacctg
ccaagcatcatcactgcacatgtcttagatccacaagagggagaaagaatactggacatg
tgtgctgcccctggtggaaaaacaactgcaattgcttcccttatgaaagataaaggagag
gtgattgcagttgataggtctcacaacaaggtgcttgaaattcacaatctagctgcagaa
ctggggttgactagcataaaagcatataagttagatgccctaaaagctgtttgtgaaaac
aacttagttacacaaagttgtggtcaaagtcaagcaagtgaagaggcagagtcaatgagc
tgtgttaccaaagatttaccgattttggagaaagttaataataataataatagagaggat
gagggaatgaaagtaggttgttataaaagtaaagcagaggaaaggaaagaaagaagaagg
atgaagaatgggcccgggagaaaccaatcgacaggtggcagggtggataaatgtgaaggc
tttttgtcaaacagttttgacagagtccttcttgatgctccttgttctgctcttggattg
agaccccgcttgtttgctggagaggatacggtggaatcattgagaagacatgggaagtat
cagaagcgattgtttgatcaggctgttcagctggttcgcccgggtggagttcttgtatat
tccacatgcacgataaatccaggggaaaatgaggcattggttcgttatgctttggacaca
tacaagtttctttcattagcacaacaggatccaagaattggtggacctggtttggttggt
cattgtgagttatcaaatggatattttgaggaatggttgagagctggtgaggaagatctt
gtccagaggtttgatccttcgggcccacatgatacaattggatttttcatagccaaattc
acagttggccccaaagattag
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