KEGG   Lactuca sativa (garden lettuce): 111914768
Entry
111914768         CDS       T05352                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5C
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03020  RNA polymerase
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111914768
  09124 Replication and repair
   03420 Nucleotide excision repair
    111914768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111914768
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111914768
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111914768
  RNA polymerase III system
   RNA polymerase III
     111914768
  RNA polymerase I system
   RNA polymerase I
     111914768
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111914768
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 111914768
NCBI-ProteinID: XP_023766259
LinkDB
Position
4:complement(48611733..48613331)
AA seq 232 aa
MASRCSTAGLGYVAPTEGSGNTCIMDKADTVAVESHRYYLARRTVLEMLRDRGCVIADYE
FTRTLTEFRLVFGDEPDPDHLRICVPLSSKPSKKILVIFCNPGDINKATAKHMLLNITNK
DTLLRIILVLQGKMNIHARALFNESEVKVEFFPITELFVNITKHVAAPKHEILTAEQKEQ
MLKKYELADTQIPYMWVDDAIARYYGLEKKQVVKITYNSNITGSYVTYRCVI
NT seq 699 nt   +upstreamnt  +downstreamnt
atggcttcccgctgtagcacagctggacttggttacgtcgctccgactgaaggcagtgga
aacacctgcattatggacaaggccgataccgtcgcggtggagagccaccgttactacctt
gcacggcgaactgttttggaaatgttaagagacagaggatgcgtcatcgccgactacgag
ttcactcgcactctcactgagttccgcttggtgtttggagacgaacctgatcccgatcac
ctgcgtatctgcgtccctctctcttccaaaccttccaaaaagattttggttattttctgt
aatcctggggatataaacaaagcaacagcgaagcacatgttgcttaacattaccaacaag
gataccttgcttcggattatcttagttttgcagggcaagatgaacattcatgctcgtgca
ttgttcaatgaatccgaagtcaaagtggaatttttcccaatcaccgaactgtttgtgaac
atcaccaaacatgttgctgcaccaaagcatgaaatcttgactgcagaacagaaggagcag
atgcttaagaagtatgaacttgctgacacgcagattccatatatgtgggtggatgatgct
attgcaaggtactatggacttgagaagaagcaagttgtcaaaatcacttacaacagcaac
ataactggttcttatgttacctatcgttgtgtgatatga

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