Lactuca sativa (garden lettuce): 111914787
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Entry
111914787 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111914787
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111914787
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
111914787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-Nse
Tmpp129
RINGv
Prok-RING_1
zf-RING-like
DNA_ligase_ZBD
zf-RING_4
zf-RING_6
Prok-RING_4
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
111914787
NCBI-ProteinID:
XP_023766264
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All DBs
Position
9:114229999..114231431
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AA seq
319 aa
AA seq
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MQLLIIPNEPKWVIVGFMLLSADNYAAEDTILSPPMPSPYEKPSTKINPTMAIILVCLLS
AFFMICVISTYFRHFTERQLRLARSTQNLSETGSMRSVVHGLDPAVIATFPSFLYSSVKG
IKIGQTVLECAVCLNEFQDHETLRLLPKCSHVFHQDCIDTWLASHVTCPVCRANLVLLPG
ELDHMTELLHCPVDPEIDYASTEFLLPVEFKHKIPPSTEMPRSHSTGHSVIIRPVENTER
YTLRLPNEARGLFGNLVASLPTSPHMALPMESSQKMSLRSISVGSVRRLDYVHHEVSNYE
RRRGQTSRGGPSDSHIVDC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaactccttataattccaaatgaacccaaatgggttattgttggttttatgttactt
tcagcagataattacgcggcagaagatacaatcttatcaccaccaatgccctcgccgtat
gagaaaccgtctaccaagatcaacccaacaatggcgattatactggtgtgccttttaagt
gcattcttcatgatttgtgtaatctcgacctacttccgccattttactgaaagacaactc
cgactagcaaggagtacacaaaacctaagtgaaacggggtcaatgagatcggtggtgcat
gggcttgatccggcggtgatagccacattcccaagcttcttgtattcaagtgtaaaaggg
ataaagatagggcagacggttctagaatgcgccgtgtgcttaaatgagtttcaagaccat
gaaaccctacgtttgctaccaaaatgcagccacgtgtttcaccaggattgtattgacacg
tggctggcttcacatgtcacatgcccggtgtgtagagcgaatctagtcttgttacctggt
gaactcgatcatatgactgagttgttgcactgcccagttgacccggagatagattatgca
tcgactgagtttcttcttccagtagagttcaaacacaagatacctccatccactgaaatg
ccacgttcacattcaactggtcactcggttataattcgacccgttgaaaatactgagaga
tacacacttcggttaccaaacgaagcacggggcctttttgggaaccttgtagcgagcctt
cccacaagccctcatatggcattgccaatggagagtagtcaaaaaatgagccttcgaagt
attagtgttggttcagttagaagattggattatgttcatcacgaggtttctaattatgaa
agacgaagaggccaaacatcaaggggtggtcctagtgattctcacatagttgattgttga
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