KEGG   Lactuca sativa (garden lettuce): 111914787
Entry
111914787         CDS       T05352                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111914787
Enzymes [BR:lsv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111914787
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    111914787
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-ANAPC11 zf-RING_16 zf-C3HC4_3 zf-Nse Tmpp129 RINGv Prok-RING_1 zf-RING-like DNA_ligase_ZBD zf-RING_4 zf-RING_6 Prok-RING_4 PHD_NSD
Other DBs
NCBI-GeneID: 111914787
NCBI-ProteinID: XP_023766264
LinkDB
Position
9:114229999..114231431
AA seq 319 aa
MQLLIIPNEPKWVIVGFMLLSADNYAAEDTILSPPMPSPYEKPSTKINPTMAIILVCLLS
AFFMICVISTYFRHFTERQLRLARSTQNLSETGSMRSVVHGLDPAVIATFPSFLYSSVKG
IKIGQTVLECAVCLNEFQDHETLRLLPKCSHVFHQDCIDTWLASHVTCPVCRANLVLLPG
ELDHMTELLHCPVDPEIDYASTEFLLPVEFKHKIPPSTEMPRSHSTGHSVIIRPVENTER
YTLRLPNEARGLFGNLVASLPTSPHMALPMESSQKMSLRSISVGSVRRLDYVHHEVSNYE
RRRGQTSRGGPSDSHIVDC
NT seq 960 nt   +upstreamnt  +downstreamnt
atgcaactccttataattccaaatgaacccaaatgggttattgttggttttatgttactt
tcagcagataattacgcggcagaagatacaatcttatcaccaccaatgccctcgccgtat
gagaaaccgtctaccaagatcaacccaacaatggcgattatactggtgtgccttttaagt
gcattcttcatgatttgtgtaatctcgacctacttccgccattttactgaaagacaactc
cgactagcaaggagtacacaaaacctaagtgaaacggggtcaatgagatcggtggtgcat
gggcttgatccggcggtgatagccacattcccaagcttcttgtattcaagtgtaaaaggg
ataaagatagggcagacggttctagaatgcgccgtgtgcttaaatgagtttcaagaccat
gaaaccctacgtttgctaccaaaatgcagccacgtgtttcaccaggattgtattgacacg
tggctggcttcacatgtcacatgcccggtgtgtagagcgaatctagtcttgttacctggt
gaactcgatcatatgactgagttgttgcactgcccagttgacccggagatagattatgca
tcgactgagtttcttcttccagtagagttcaaacacaagatacctccatccactgaaatg
ccacgttcacattcaactggtcactcggttataattcgacccgttgaaaatactgagaga
tacacacttcggttaccaaacgaagcacggggcctttttgggaaccttgtagcgagcctt
cccacaagccctcatatggcattgccaatggagagtagtcaaaaaatgagccttcgaagt
attagtgttggttcagttagaagattggattatgttcatcacgaggtttctaattatgaa
agacgaagaggccaaacatcaaggggtggtcctagtgattctcacatagttgattgttga

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