Entry |
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Name |
(RefSeq) mRNA-decapping enzyme subunit 2
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KO |
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Organism |
lsv Lactuca sativa (garden lettuce)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:lsv00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111915063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lsv03019]
111915063
Enzymes [BR:lsv01000]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
111915063
Messenger RNA biogenesis [BR:lsv03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111915063
mRNA degradation factors
5'-3' decay
Decapping complex
111915063
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
9:complement(100016743..100019698)
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AA seq |
328 aa
MSSAGLPRSSSAPLKDGIPPKELLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDN
SVENNPSLKSFTLKEFTSLMFNSCDVLKPYVPHIDDIFKDFTSYKVRVPVTGAIILDQTY
ERCVLVKGWKGTSWSFPRGKKNKDEEDDACAIREVLEETGFNVSKLINKDEFIEMTFGPQ
RVRLYIVGGVKDDTTFAPQTKKEISEIAWQRLDELQPANRDVISRSVAGLKLYMVAPFLK
SLRSWISSHQPPIAPKPDTPARAMSVWKARGSSSGTNLVMTETPSNNNPVSVSVSVSNSS
EKVGPGRSFRSFQFNSGPILQAIESAFL |
NT seq |
987 nt +upstreamnt +downstreamnt
atgtcgtcagctgggcttcctagatcttcgagtgctcctttgaaagacggcatccctcct
aaagaactcctcgacgatctctgcagtcgctttgttctgaatgtgcccaaagaagatcaa
caatcatttgaaaggatcttgtttcttgtggagtatgcacattggttctatgaagacaat
tctgtagaaaataatccatctttgaagtcattcactcttaaggaatttacatctttaatg
ttcaacagttgtgatgttctaaagccttatgtcccacatatagatgacatattcaaagat
ttcacatcatacaaggttcgagttcctgtaacaggggcaattattttggatcaaacatac
gaaaggtgtgtactagtaaaaggatggaaaggaacaagttggagttttccaagagggaaa
aagaacaaagatgaggaagatgatgcttgtgctatcagagaagttcttgaagaaacagga
tttaatgtttcaaaacttattaacaaagatgagttcattgaaatgacatttgggccccaa
agggtgcgactttacatagttggaggtgtgaaagatgatacaacatttgcccctcaaacc
aaaaaagagatcagtgaaattgcatggcagaggcttgatgaacttcaaccagcaaatcga
gatgtaatttcacgaagtgtagctggtcttaagctttacatggttgctccatttttaaaa
tctttgagatcatggatttcttcacatcagcctccaattgcaccaaaaccagatacacct
gctagagcaatgagtgtgtggaaggcaagggggagttcttcggggaccaatttagtgatg
acagagactccatcaaacaataacccggtttcggtttcggtttcggtttcaaattcatca
gagaaggtgggcccgggtcgaagcttcaggagctttcaattcaatagtgggcccatattg
caagcgattgaaagtgccttcttgtga |