Lactuca sativa (garden lettuce): 111915192
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Entry
111915192 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111915192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111915192
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111915192
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
HECT type E3
111915192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
Motif
Other DBs
NCBI-GeneID:
111915192
NCBI-ProteinID:
XP_023766631
LinkDB
All DBs
Position
1:complement(67609628..67616210)
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AA seq
1392 aa
AA seq
DB search
MGNRGHKRSETVDELPADKRTCSSLEFRPSSSMSPVETPSTSTNQTHDHDHEMETSSSAS
GSGRTDEDKDSAYGSCDSEETGDADQRRQRHAILDYQRQRLSADQAKFKRVLSNLSEETE
ESAQQEALRELCEILSFCTDSSLSSLIADSLSPILIKLASHESNPEIMLLSIRALTYLCD
IHPQSSALIIRHDGVTALCKRLLAFEYEDVAEQCLQALEKISREQPLACLQSGAIMAVLT
FIDFFSTSLQRVALSTVVNICVKLPSEGSSPFMDAVPVLCKLLQYEDNQLVEHVATCLIK
IAERVQESSEMLDELSKHGLIHQVAHLIDLNSHTTLSHSVHTGLIGLLVKLASGSMVAVK
TLFDLNISSILKEILSIYDLSHGVPSPRTIDGHYNQMHEVLKLLIQLLPVVSRNQEVPLA
AEKEAFLVTHPDLVEKFGNDLLPVLIQVVDSGVDLYICYGCLSVVDKLLYYSNSDMLLDL
LKSTNISRFLAGVFTRKDIHVLMLALNISDTILQKNTDVFMGPFVKEGVLFAIDALIDPE
KCSQFMFSMFNDIQLSNTSSKKYAGKDVIRCLCFSFDVNKTSSSSESRKCKLELECVRTL
AKHIRTKYFDTNSSTSETGMTPILEKLKSLSSELSSMMTQEGYDHVLHQIMSILNGRDVI
STFEFVESGITDSLVSYLSNGDCSRVEAFGRLFLSCTNQPLDYFSLSGFISKLQSALSSV
EDFPVVLNNSFKHRNSYATVPRRHSTTYPCLRVLFVKEEGESTLTEYTGDVQTVDPFSDF
EAIETFLWPKVCLNNAQSPSDKSQHDVGQSQTSPQKPTEDASSSQKLSFYLEGKEIDRGL
TIYQAVLSQHISEFDTVNGLLWNQLHKITFKKSLTLEKSSSPSEIGSSVEKSTPCHNLLF
LLRILESVNECRFHLMTRERIEAFSEGKIGNLDDVKATNEGILVNEFVNTRLTEKLEQQM
RDPLAICTGGMPSWCTQLMTSCPFLFSFEARWKYFKLVALGKHQGQNGQNDSPMPRKKFL
VYRNQILESASKMMDLHANQKVVLEVKYDEEVGTGLGPTLEFFTLVSNEFQKPGMGMWRG
DNSGIGIVNSVPFGLFPSPLRNSITDVNKKFVLLGQVVAKALHDGRVLDIPFSKAFYKLI
LGKELTVYDIQSFDAGLGKTLIEFQALVERKKNLEKFGKNSEFEFRGSKIQDLHLDFTLP
GYPDYILASGPDKEMVNMMNLENYIELVADATINSGIMKQMEAFKSGFNQVFPIKNLKIF
TDEELERLLCGESETWNSNQLSDLIKFDHGYTASSPPIIHFLEVIQEFDYEQQKAFVKFV
TGAPRLPIGGLASLNPKLTIVRKLCDKVVDADLPSVMTCANYLKLPPYSSKEMMKEKLLY
AITEGQGSFHLS
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatcgagggcataaaagaagtgaaacagttgatgaattgccagcagataagaga
acgtgtagttcattggagttcagaccaagttcatcaatgtcgccggttgaaaccccaagc
acctcgacgaatcaaacccacgatcatgaccacgaaatggaaacatcttcatctgcttct
ggttcagggcgtacagacgaagataaggattcagcatatggctcctgtgattcagaggaa
accggtgatgcagatcaaagacgacaaaggcatgctatacttgattaccaaaggcaaagg
ctatctgctgatcaagcgaaattcaaaagggttttatcaaatctgagtgaagaaaccgag
gaatctgctcaacaggaagcgctcagggagctttgtgaaatactctcgttctgtacagac
agttctttatccagtttaattgcggattccttgtctcccattcttataaagctggctagc
catgaaagcaatcctgagatcatgcttctatctattagggctctaacttatctctgtgac
attcatcctcaatcctctgctttaattatacgacatgatggagttacagcactttgtaag
agattactggcttttgagtacgaagatgtagctgaacagtgtttgcaagcattagagaag
atatcacgtgagcaaccacttgcttgtttacaatctggtgcaatcatggctgttcttact
ttcattgatttcttctccacaagtctccagagggttgctctttccactgtggtaaatata
tgtgtgaagcttccatctgaaggttcttcaccttttatggatgcagttccagtactttgc
aaacttttacagtatgaggacaatcagcttgttgaacatgttgctacatgcttaattaaa
atagcagaaagagtacaagaatccagtgaaatgcttgatgaactttctaaacatggattg
attcatcaagtggcacatcttatagacttgaacagccataccactctatctcattctgtt
catactggtttaattggactacttgttaaacttgcttctggttctatggtagctgtgaag
acactttttgatcttaatataagtagcattttgaaagagatcttgtcaatatatgacctt
tcacatggagtcccttcccctcgaacaattgatggacattataatcaaatgcatgaagtt
ttgaagttgttgattcagcttctacccgttgtatccagaaatcaagaagttccattagct
gcagaaaaagaagctttcttggtgactcatcctgatcttgtagagaaatttgggaatgat
ttattacctgttttgatccaggttgttgattctggagtggatttatatatctgttatggg
tgtctatctgttgtggacaagttactttattacagcaactctgatatgcttcttgatttg
cttaaaagcaccaacatttcaaggtttttggctggagtgttcactaggaaggatatacat
gtactaatgctagctcttaatatctctgacactatcctacaaaagaatactgatgttttc
atgggaccttttgttaaagaaggtgttctttttgccattgatgcacttatagaccctgaa
aagtgttcacagtttatgttttcaatgttcaacgacatccaattatcgaatacttcaagc
aaaaaatatgctggaaaagatgtgattcgctgcttatgtttttcttttgatgtcaacaaa
acttcatcatcttcagaatcaaggaaatgtaagttggaattggaatgtgttcgaactctt
gcaaaacacataagaacaaagtactttgacacaaattcctccacctcagagactggaatg
actccaattcttgaaaagctgaaatctttatcttctgaattatcttccatgatgacacaa
gagggatatgatcatgtcttgcatcaaatcatgtcaattctcaatggcagagatgtgatt
tccacttttgaatttgtcgagagcggaatcactgattccttagttagttacctttctaat
ggggattgttctagagtggaggcatttgggaggctgtttttatcatgcacaaatcaaccg
cttgattacttctctttatctggatttatctcaaaactacaaagtgctttatcttctgtt
gaagattttcctgttgtgttaaacaattcattcaaacacaggaattcatatgccactgtg
ccacgtaggcattccaccacttacccatgtctcagagttctatttgtgaaagaagaggga
gagtcaactttgactgaatacacaggagacgttcaaactgttgatccattttcagatttt
gaagcaattgaaactttcttatggcctaaagtttgcttaaacaatgctcaatcaccctct
gataaaagtcaacacgatgtcggtcaaagtcaaacttctcctcaaaaaccaacagaggat
gccagttcttcacagaaactatcattttaccttgaaggaaaggaaattgaccgagggttg
actatttatcaagctgttcttagtcaacacatatcagaatttgacactgtgaatggatta
ttgtggaatcaattacacaaaataacattcaaaaaatcattaaccttagaaaaaagtagt
tccccttctgaaattggttcttctgttgaaaagtcaactccatgtcacaacttattgttt
ttgctgagaatcttggaatccgtgaacgaatgtagattccatctcatgactcgcgaaaga
attgaagcgttttccgagggcaaaattggaaacttggatgatgtaaaagcaacaaacgag
ggtattttggtcaacgagtttgtgaacactaggttaacagaaaaactcgagcaacagatg
cgggacccgttggcaatatgtacaggtggcatgccatcatggtgtacacagttgatgaca
tcatgccctttcttgtttagtttcgaggcaagatggaagtacttcaagttagtagcgttg
ggtaagcaccaggggcaaaacggtcaaaatgattcccctatgccacgaaaaaagtttttg
gtttatagaaatcagattcttgaatcggcttccaaaatgatggatttacatgcgaatcaa
aaagttgttcttgaagtgaaatatgatgaagaagttggtacgggtctgggtcccacattg
gagttttttacacttgttagtaatgagtttcagaagcccggaatgggaatgtggcgaggt
gacaactccggaatcggaattgttaattccgttccgttcggactctttccttcgccgttg
cgtaattccatcacggatgtgaataaaaaatttgtgcttttagggcaggtggttgcgaag
gctcttcatgatggaagggttttggatattccgttttcaaaagctttttataaactaatt
cttggaaaggaacttactgtgtatgacatccagtcgtttgatgctggtttgggtaaaacc
ttgattgagtttcaagctcttgttgaaagaaaaaagaatttagaaaaatttggaaaaaat
tcagaatttgaatttcggggttcaaaaattcaagatttacatctggattttactcttcct
ggatatcctgattatattcttgcttctggtcctgataaagaaatggtgaacatgatgaat
ttggagaattatattgaacttgtggctgatgcaacgataaattctgggattatgaaacaa
atggaagcttttaaatctggatttaatcaggttttcccgattaaaaatctcaagatattc
accgatgaggaattagagcgtcttttatgtggcgaaagtgaaacttggaattcaaaccag
ctttcagatcttataaagtttgatcatggatatactgctagtagtcctcccattatacac
tttctggaagtcatacaagaatttgactatgaacagcaaaaagcttttgtgaaatttgtg
actggtgcaccacggcttcctattggtgggttggcatcactcaacccaaaactcacaatc
gtacgcaagctttgtgataaagtggtggatgcggatcttccaagtgtgatgacatgtgct
aattatctgaaattgcctccgtattcttctaaggaaatgatgaaggagaagctgttatat
gcaataacagaagggcaaggatcgtttcatctctcttag
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