Lactuca sativa (garden lettuce): 111915697
Help
Entry
111915697 CDS
T05352
Name
(RefSeq) truncated transcription factor CAULIFLOWER A isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111915697
Transcription factors [BR:
lsv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
111915697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
DUF1192
Acetyltransf_11
Motif
Other DBs
NCBI-GeneID:
111915697
NCBI-ProteinID:
XP_023767093
LinkDB
All DBs
Position
1:17987823..17993429
Genome browser
AA seq
238 aa
AA seq
DB search
MGRGRVTLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDADVGLIIFSTKGKLCEFASD
ASNRMESILERYERHSYEERNNTTTDEESIGKWTLEHAKLKSRIELLQKTQSHVMGEDLD
SLSLKELQNLEHQMDTSIKHIRLRKNQLMTETISMLQKKEKALQNQNNTLSKKIIEVEKE
QSQQPPVEQQNNDNMPSLHFSTFITTCEGRIDGPEKAIPRKGQPSIVLPPWMLQHINQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggaagagtgacgttgaagaggatcgaaaataagatcaaccgccaggtcact
ttctcgaaacggagatcaggattgttgaagaaagctcatgaaatttccgtcctctgtgat
gccgatgtcggcctcatcatcttctccaccaaaggaaagctctgcgagtttgcttccgat
gcatccaacaggatggaaagcatccttgagaggtacgaaagacactcatatgaagaaagg
aacaatactacaaccgatgaagaatcaatcggtaagtggacattggaacatgcgaagctc
aaatctagaattgaacttttgcagaaaacccaaagtcatgttatgggagaagaccttgat
tccttaagtctcaaagagcttcaaaacttggagcaccaaatggatacgtctattaaacat
attaggttgagaaagaaccaactcatgactgagacaatttctatgctacagaaaaaggaa
aaggcattgcagaatcaaaacaacacattgtcaaagaagatcatagaagtagaaaaagaa
caatcacaacaacctcctgtggagcaacagaacaatgacaacatgccttcacttcatttt
agcaccttcattacgacatgtgagggaagaattgatggaccggaaaaagcaattccaaga
aaaggtcaaccttcaatagtattgcctccatggatgcttcagcatataaaccagtaa
DBGET
integrated database retrieval system
