Lactuca sativa (garden lettuce): 111915748
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Entry
111915748 CDS
T05352
Name
(RefSeq) protein SHI RELATED SEQUENCE 5
KO
K27807
short internodes/stylish family transcription factor
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111915748
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
111915748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
111915748
NCBI-ProteinID:
XP_023767166
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All DBs
Position
1:19997882..20000521
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AA seq
410 aa
AA seq
DB search
MSGLFSLGGGFGIGKDEEEQQHDHHNQEQEDSIITPNSLYLFKNEDIYSKGFELWQQYYQ
LHQHRQQNHHQQPPHYDLSVGGGCTGRRRSSTASGGVDDLCLNSNSSNNNNNNHHHLYAS
SWNFVDRSSGSGDETKVMRQTGYSIGGGDHGGGGSGSGGGGMNCQDCGNQAKKDCQHMRC
RTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLSSLTQQQQQQQQHHHNLGNQQLSLMMRG
GGIDQNPKRLREDHQLMTTGGSGGGGGGVTLNLPSTHHHTTSSGFEVGHFPAEVSSPAIF
RCVRVSAMDEAEEQLAYQTAVNIGGHLFKGILYDHGPEGRYNHPAGGGDSSSAGGAQHHQ
QLNLITSATMGIPAATSVNPHVTSIDPSSIYPAPLNAFMAGTQFFPPPRS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttgttctcactaggtggagggtttggaattggtaaagacgaggaagaacag
caacatgatcatcacaatcaagagcaggaagatagtataatcacacctaatagtttgtat
ttgttcaagaacgaagacatctacagcaaaggattcgaactatggcaacaatattaccag
cttcaccagcaccgccagcagaaccaccatcagcaaccaccgcattatgatttgtctgtc
ggtggtggttgtacaggtaggagaagaagtagcacggcgagtggtggtgtggatgatctt
tgtcttaacagtaacagcagcaacaacaacaacaacaatcatcatcatctttacgcgtct
tcgtggaatttcgttgatagatcaagtggaagtggtgacgagacgaaagtgatgaggcaa
actgggtatagcatcggtggcggagatcatggtggtggtggcagtggcagtggtggtggt
gggatgaattgtcaagattgtggcaaccaagcaaagaaagattgtcagcacatgcggtgt
agaacttgctgcaaaagccgtgggtttcaatgtcaaacccatgtcaagagcacctgggtt
cccgcagccaaacgccgggaacgtcaacaacagctctcttcgttaacgcaacaacagcag
caacagcaacagcatcaccataatttagggaatcagcagctgagtttgatgatgagaggt
ggtggtattgatcagaatcccaagagactacgtgaagatcatcagctaatgaccaccggt
ggtagtggtggtggtggtggtggtgtgactttaaatttgccttctacgcatcatcacacc
acttcttcagggttcgaagtgggtcatttcccggcggaagtgagttctccggcgatattc
cggtgcgttagagtgagtgcaatggacgaagcggaggagcagctagcatatcaaacggca
gtcaacatcggaggacatcttttcaagggaattctctacgatcatggtccggaaggtcga
tacaaccacccagcaggtggtggtgatagttcctccgcaggtggcgctcagcatcatcaa
caacttaacctcattacttccgccacgatggggattcccgccgccacctccgtcaatcca
catgtcacatctattgatccttcctccatatatccagctcctctcaacgctttcatggcg
ggtacgcaattcttcccaccaccaagatcttga
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