KEGG   Lactuca sativa (garden lettuce): 111915923
Entry
111915923         CDS       T05352                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111915923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111915923
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lsv02044]
    111915923
Membrane trafficking [BR:lsv04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111915923
Secretion system [BR:lsv02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   111915923
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WD40 TPR_Sec16 WDR55 TPR_GEMI5 Beta-prop_EML Beta-prop_EIPR1 SRA1 MIOS_WD40 WD40_MABP1-WDR62_1st Prp18
Other DBs
NCBI-GeneID: 111915923
NCBI-ProteinID: XP_023767336
LinkDB
Position
1:complement(151078560..151089659)
AA seq 1106 aa
MGTSACVKEVDRSALVAFAPDAPFLAAGTMAGAVDMSFSSSANLEILNLDFRSDDRDLPV
SGAVPSSEPFNRLSWGKSPSSGSEEFSLGLIAGGLVDGNIGVWNPRLLMSPEERENALVQ
QLSRHKGPVRGLEFSSLSPNHLASGAEEGEICIWDFAKPTEPTHFPPLKGSESSTHGEIA
YLSWNKKVQPILASTSFYGTTVVWDLRKQKPIISFSDSVRRRCSVLQWHPDFATQLIVAS
EDDNSPSLRLWDMRNTMSPLRELVGHTKGVVAMEWCPHDSSYLLTCAKDNRTICWNTNSA
EIVSELPAGTNWNFDVHWYPKLPGVISASSFDGKIGIYNIEACARYGVGEGHYGSAPLKA
PKWYQRKAGVSFGFGGKLVSFHTTGSSSGASEVDVHELVTEHSLVSTSSEFEAAMSSGER
PLLRQLCDKKSQESESEDDKETWGFLKVMFEEDGTARTKLLNHLGFTLPSETQNNELQNN
PSESEDITTSHIDEPKEGEVTESNLTLKLPNDPSDNGEDFFNNFPTPRAETPSSTSHNTF
VTEESGPVVEEEEEPTRESDSQDALFDDGVQRALVVGDYKGAVEQCIAANKMADALVIAQ
VGGASLWETTRDQYLKKNTSPYLKVVAAMVNNDLVSLVNIRPLRSWKETLALLCTFAQGD
EWTSLCDTLASRLLNAGNTLAATLCYICSGNIDKTVEIWSKKVSTEHEGKSYVDLLQDLM
EKTVVLALATGQKRFSAPLCKLVEKYAEILASQGLLSTAMEYLKLMGTEDLSPELVILRD
RIAFSSQPEINGNASTDYAYSQTHTGGVYSANQQTNPVVEPVQSYYQENYQQPTGPSYSN
QYEQPQRNMFVPSPAAPTPQLGFNQAPPANQPAARPFVPMTPPMMRNADQYQQAPTLGSQ
LYPQSQLNANSNYQAGPPGPGSFHPVPSPMVPTTGPKVLHDVGPTPPVKGFMPINNNTGM
QRTGSGQMQPNSGPESAAPPPATPPPTVQTADVSNVPAQQKPVIGTLTRLFNETSEALGG
SRAVPAKKREIDDNSKKLGALFVKLNNSDISKNAAEKLVQLCQALNHGDFTTALKIQVDL
TTSEWDECSFWLATLKRMIRIRQSMG
NT seq 3321 nt   +upstreamnt  +downstreamnt
atgggcacatcggcgtgtgtaaaggaagtggatagatcggcattggtggcgtttgccccc
gatgcgcccttccttgccgccggaactatggctggagccgtagacatgtcgttcagttcg
tctgcaaatcttgaaatccttaaccttgatttccgatctgatgatcgtgaccttccggta
tcaggtgctgtacctagttcagaaccgtttaatcggctgtcttgggggaaatcaccgtcg
tcgggatcagaagaattctcactcggtctcattgccggtggacttgtagatggcaacatc
ggtgtctggaaccctcgcttactcatgagtccggaggaaagggaaaatgctcttgttcaa
caactatcaagacacaaagggcctgttcgtggtctggagtttagttccctttcaccaaac
catcttgcatctggcgctgaagaaggtgaaatttgtatatgggattttgctaaaccaaca
gagcctacgcatttccccccccttaagggcagtgaatcttcaacacatggagaaatagca
tatttgtcatggaataagaaggtccagcctatcttggcatcaacttctttttatggaaca
actgtggtttgggacctcaggaagcaaaagccaattataagcttctcagattcggttaga
agaagatgttcagttttgcaatggcatcctgattttgccactcaacttattgttgcttca
gaggatgataattcaccttcactaaggttatgggatatgaggaacacaatgtcaccattg
cgagagttagtaggtcatactaaaggtgttgttgcaatggaatggtgtccccatgatagt
tcatatctgcttacatgtgccaaagataatcgtactatttgttggaacactaattctgct
gagattgtgtctgaacttccagctggaaccaattggaattttgatgtgcactggtatcca
aagttaccaggggtcatatcagcatcttcttttgatgggaaaattggtatttataacatt
gaggcttgtgctcgatatggtgttggtgagggtcattatggctcagcacctttaaaggct
ccaaaatggtaccaacgcaaagctggagtgtcttttggttttggtggcaaacttgtttct
tttcacacaactggttcttcatctggagcttcagaggttgatgtgcatgagttggttact
gaacatagtttagttagcacctcatctgaattcgaagctgcaatgagtagtggagagagg
cctttattgaggcaactttgtgacaaaaaatctcaagaatctgaatctgaagatgacaaa
gaaacatggggattcttgaaggttatgtttgaagaagatggaactgcacgtacaaaacta
ttaaaccatcttggtttcactctaccttcagaaacacaaaacaatgaattacaaaacaac
ccctctgagtctgaggatataacaacttcccacattgatgaacctaaagaaggagaagta
acagaatccaacctgacactgaaattaccaaatgacccctctgacaacggggaagatttc
ttcaacaatttcccaactcctagagctgagaccccttcatcaacttctcataacactttt
gtcactgaagaatctggtccagttgttgaagaagaagaagagccaacaagagaaagtgat
tcacaagatgctttgtttgatgatggtgttcaacgggcattggttgttggggattacaag
ggagctgttgaacagtgtatagctgcaaataagatggcagatgctttagttattgctcaa
gttggtggtgcttccctgtgggagaccacacgtgatcagtaccttaaaaagaatacttct
ccatacttaaaggttgttgctgcaatggtaaataatgaccttgttagtctagtaaatatc
aggcccctcagatcttggaaagaaactcttgctctcctctgcacttttgcacaaggagat
gaatggacttcactctgtgatactcttgcttctagactcctaaatgctggaaacacttta
gcagcaactctttgctacatatgctctggaaatatcgataaaactgtagaaatctggtca
aagaaggtttcaactgagcatgaaggaaagtcctatgttgatcttcttcaggatttaatg
gagaaaactgtagtccttgctttagcaactggacaaaagagattcagtgctcctttatgt
aaacttgttgagaagtatgctgagattttagcaagtcaaggacttttatcaacagctatg
gagtatttgaaactaatgggaactgaagatttgtctcctgaacttgtaatcttacgtgat
cggattgccttctcctctcaaccagagataaatggaaacgcatctacagattatgcatat
tctcaaacacatacaggaggtgtatactctgctaaccaacaaacaaatcctgttgtggag
cctgttcaaagttattatcaggaaaactatcaacaaccaactgggccttcttacagcaac
caatatgaacagccacaacgtaacatgtttgttccatctcctgcagctcccactccacag
ttgggattcaatcaagctccacctgcaaatcaaccggctgcaagaccctttgttcccatg
acacctccaatgatgagaaatgctgaccaatatcagcaagctcccacattgggttctcag
ttatatcctcaatctcagttgaatgcaaattccaattatcaagcaggcccaccggggccc
ggttcctttcacccggtcccatctccaatggtccccaccaccgggccaaaggtactccat
gatgtgggacccacacctcctgtaaaaggattcatgccaattaataacaatacaggaatg
caaagaacaggatccggtcaaatgcaacccaacagtggccccgagtctgctgcaccacct
cctgccacacctcctccaacagtacagactgctgacgtgtcaaatgttcctgcccaacag
aagccggttattgggacattgaccagactgttcaacgagacatcagaggctttaggaggt
tcacgagcagttccagctaagaaacgagagattgatgacaactcaaagaaactcggtgct
ttgtttgtgaaattaaacaattctgatatttccaaaaatgctgctgaaaaacttgttcag
ttatgtcaagcattaaatcatggcgacttcactacagccctcaaaatccaggtggatctt
accaccagtgaatgggacgagtgtagcttctggttagcaacactgaaacgaatgatcagg
attagacaaagtatgggataa

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