Lactuca sativa (garden lettuce): 111915984
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Entry
111915984 CDS
T05352
Name
(RefSeq) DNA mismatch repair protein MLH3
KO
K08739
DNA mismatch repair protein MLH3
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111915984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111915984
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111915984
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
111915984
NCBI-ProteinID:
XP_042755175
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Position
2:162942617..162948531
Genome browser
AA seq
1021 aa
AA seq
DB search
MRSIKVLPESVRNSLRSGIILSDLTRVVEELVFNSLDAGATKVIVAVGVGTNYIKVTDNG
CGITRDGLVLLGERYATSKFEQLSGLNTVPESFGFRGEALSSISDLSLLQVVTKAHGMPN
GYCKVIKCSKCLYLGIDDDRQNVGTTVVVRDLFYNQPVRRRHLQSSPKKVLHSVKECILR
IALVHLGTCFKVNDIESGDELLSLYPSSSPLPLLVSSFGTEVSSSLHKLDESDDKLKLSG
FISSPCETFSVKAFQYFYINSRYISRGPIHKLLNQLATESELLKGDIRSECGKRSRYQAC
LTYILNLSCPRAHYDLSFEPTKTCAEFKEWDPVLTFIKKAVSCFWNQDPLNDSEVPKKRR
VTWSHETSIVLSSPQLQMPTESKHMSHLSDAKWNPNNKLLLKESSPIQFHFDNHLIKPFL
RSCSSHLDLSPVVTKIQDDEFDNIIQGSESWLDKSTTVWSPPRIISTSNLSVDSPFLPKE
SFDSLLTDGDLFTENNNSPWDTPVASKHQSDWSPLMFDESRDDVDFKLRRDDWFDLFADE
EGEKDIFDFDNMRYSSSQEGYMSCKGHVKNSQKDTLLCDFMNGIDWASPESYMSSLSCGE
RVKKTKVTQSSFQDKKKPRRRSHSAPPSYRGKRKFIALNSQMSVESGNSQFETPHNASLQ
EASDLRHVQKSSGVDHLLLEEGEDPTKARHDKKKVIDKAEISDYEGEAAHCLDVFNTDSD
FTSRDNEGALDLGEKWRSGYPWDSSIEKKGDEDKILDISSGILHLSGDSLTLTPKSISKK
CLDDSKVLQQVDKKFIPIVGGGILAIIDQHAADERIRLEDLRKKVLSGKMKTICYLDAEQ
ELVLPEIGYQLLINYSEQIKKWGWICNFHAQSSVSFKKNLNFLHNQPSVATLIAVPCILG
VNLTDADLLEFLKQLADTDGSSILPPAVVRVLNTKACRGAIMFGDALLPSECSLIVEELK
KTSLCFQCAHGRPTTVALVDMVVLHKQIGKLGNWNRGSCGSWHGLSRHRPTLERATQRLS
Q
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcatcaaggtattgcctgaatctgttagaaattctttgcgttcaggcatcatt
ttgtcagacttaacaagggtagtagaagagctggtgttcaacagccttgatgctggtgcc
acaaaggtgattgtagcagtaggtgttgggaccaattacattaaagttacagacaatggt
tgtggcattacaagggatggattggtgttgttgggagaaagatatgctacttctaagttt
gagcagctgtctggtctgaacactgttccagagagctttggctttcgtggggaagcatta
agctcaatttctgacctttctttgttgcaagttgttacaaaggctcatggaatgccaaat
ggatactgcaaggtcataaagtgttccaaatgcttatatctgggaattgatgatgataga
caaaatgttggcacaacagttgttgttcgtgatttattctacaaccaaccagttaggaga
aggcatttacaatccagccccaaaaaggttcttcactctgttaaagaatgcatactaaga
attgctcttgttcaccttggaacttgcttcaaagtaaatgatattgaaagtggtgatgag
cttctttccttgtatccttcatcttcccctttgcccctattggtgagtagttttgggaca
gaagtttccagttctttacataagttggatgagtctgatgacaaattaaagctctctgga
ttcatatctagcccttgtgaaactttctctgtgaaggcctttcaatatttctatatcaac
tcaagatatatatcaagaggtccaatacataagttgctgaatcaattggctacagaatca
gagttgttgaagggtgacattagatctgaatgtggaaagaggagcaggtatcaggcatgt
ctaacctacatattgaacttaagttgtcctcgagctcattatgatttaagctttgaaccc
acaaagacttgtgctgaattcaaggaatgggatcctgtgttaactttcatcaagaaagcc
gtttcatgcttttggaatcaagatcccctgaatgatagtgaagttccaaagaagaggcgt
gtgacatggtcccatgagacttctattgtcctttcctcacctcaattacagatgccaaca
gaatccaaacacatgagtcatctttcagatgccaaatggaatccaaacaacaaattactt
ctcaaagaatcatcccctattcaatttcattttgataatcatctcataaagccctttctg
agaagttgctcctctcacttagatctgtcacctgttgttacaaaaattcaagatgatgaa
tttgataatattattcagggttctgaatcatggctggacaaaagtacaactgtttggtca
cctcctagaatcatcagtacctcaaacttgagtgtagactcaccttttttaccaaaagag
tcatttgattcacttctgactgatggagacttgtttacagagaataataacagtccttgg
gatactccagttgcatcaaagcatcaatctgattggtctcctctaatgtttgatgaatct
agagatgatgttgactttaaacttcgcagagacgattggtttgacctttttgcagatgaa
gaaggggagaaggatatctttgactttgataacatgagatatagctcttctcaagagggg
tatatgagttgcaaagggcatgttaagaactctcaaaaggacactcttttgtgtgatttc
atgaatggaatagattgggcaagtcctgaatcctatatgtcatcattatcttgtggtgaa
agggtaaaaaagacaaaagtcactcaatctagctttcaagataagaagaagccaaggaga
cgaagtcattcagctccaccatcttacagagggaagagaaagtttattgctttaaatagt
cagatgagtgttgaatcagggaattcccaatttgagacacctcataatgcctctttacaa
gaagctagtgatctgaggcatgtacagaaatcatcaggtgtagatcatttgctactggag
gagggtgaggatcccactaaggctagacacgataagaagaaagttattgataaagctgag
atttcagattatgaaggggaggctgcccattgccttgatgtattcaatacagattcagac
ttcacctcaagggacaatgaaggtgcattagatttaggggaaaaatggaggagtggctat
ccatgggattcaagtatagagaagaagggtgatgaggataaaatacttgacatatcttct
gggatattacacctttctggtgattctcttacacttacacccaagtctatcagtaaaaaa
tgtctggatgattctaaagtccttcagcaagttgacaaaaaattcattccaattgtgggt
ggtggaatacttgctattattgatcagcatgctgctgatgaaagaatacgacttgaagat
ttgagaaaaaaggtgctttctggaaaaatgaagaccatatgctatttggatgcagagcaa
gaactggttttacctgagattgggtatcaattactgatcaattattctgaacaaatcaag
aaatggggttggatttgtaactttcacgctcagagttcagtgtcctttaagaagaatctg
aattttctacacaaccagccatctgttgctacactcattgcagtgccatgtattttgggt
gtgaatttaaccgatgcagatctcctagaatttctaaaacagcttgctgatactgatgga
tcatctatactaccaccagctgttgttcgtgttctaaataccaaagcttgcaggggtgca
ataatgtttggtgatgcactactcccttcagaatgctcacttatagttgaagagctgaag
aagacttcgttgtgttttcagtgtgctcatggaaggccaacaactgtggcacttgtggac
atggtggtgctgcataaacagattggtaagcttggaaattggaaccgtggttcatgtggg
tcatggcatgggttgagccgacatagaccaactctcgagcgtgcaactcaacggttaagt
caatga
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