Lactuca sativa (garden lettuce): 111916033
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Entry
111916033 CDS
T05352
Name
(RefSeq) ras-related protein RHN1
KO
K07887
Ras-related protein Rab-5A
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
lsv04145
Phagosome
lsv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111916033
04145 Phagosome
111916033
04148 Efferocytosis
111916033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111916033
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111916033
04031 GTP-binding proteins [BR:
lsv04031
]
111916033
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
111916033
Endosome - Lysosome transport
111916033
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111916033
Exosomal proteins of other body fluids (saliva and urine)
111916033
Exosomal proteins of colorectal cancer cells
111916033
Exosomal proteins of bladder cancer cells
111916033
GTP-binding proteins [BR:
lsv04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
111916033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_24
AAA_16
TsaE
Motif
Other DBs
NCBI-GeneID:
111916033
NCBI-ProteinID:
XP_023767443
LinkDB
All DBs
Position
2:160714992..160716797
Genome browser
AA seq
200 aa
AA seq
DB search
MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL
AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNP
AGMVLVDRPAEGARAASCCS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgatcggacacaataatctcaacgcaaaattggttttgcttggggacatggga
gctggtaaatcaagtctcgtgttgcgattcgtcaaaggccaatttctagaattccaggaa
tcgacgatcggagcggcgtttttttcgcaaaccctagcagtgaatgatgcaacggtgaaa
ttcgagatctgggatacggcgggtcaagaaaggtatcatagtttggctcctatgtactac
aggggcgctgcagcggcaatcattgtctacgatatcactagcgcggattcatttacacgg
gctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggtaatggcactt
gctggaaataaagctgatcttgaagacaagaggaaagtaacagcagaagaggcacgtgta
tatgctgaggagaatggtctttttttcatggagacatctgctaaaactgctgccaatgtt
aacgatgtatttcatgaaattgccaagagattgcctagagctcagcctactcaaaatcca
gcaggaatggttcttgttgacagaccagctgaaggagctcgtgctgcatcttgctgttca
taa
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integrated database retrieval system