KEGG   Lactuca sativa (garden lettuce): 111916033
Entry
111916033         CDS       T05352                                 
Name
(RefSeq) ras-related protein RHN1
  KO
K07887  Ras-related protein Rab-5A
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv04144  Endocytosis
lsv04145  Phagosome
lsv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111916033
   04145 Phagosome
    111916033
   04148 Efferocytosis
    111916033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsv04131]
    111916033
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsv04147]
    111916033
   04031 GTP-binding proteins [BR:lsv04031]
    111916033
Membrane trafficking [BR:lsv04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111916033
 Endosome - Lysosome transport
    111916033
Exosome [BR:lsv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111916033
  Exosomal proteins of other body fluids (saliva and urine)
   111916033
  Exosomal proteins of colorectal cancer cells
   111916033
  Exosomal proteins of bladder cancer cells
   111916033
GTP-binding proteins [BR:lsv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111916033
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_24 AAA_16 TsaE
Other DBs
NCBI-GeneID: 111916033
NCBI-ProteinID: XP_023767443
LinkDB
Position
2:160714992..160716797
AA seq 200 aa
MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL
AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTAANVNDVFHEIAKRLPRAQPTQNP
AGMVLVDRPAEGARAASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgacgatcggacacaataatctcaacgcaaaattggttttgcttggggacatggga
gctggtaaatcaagtctcgtgttgcgattcgtcaaaggccaatttctagaattccaggaa
tcgacgatcggagcggcgtttttttcgcaaaccctagcagtgaatgatgcaacggtgaaa
ttcgagatctgggatacggcgggtcaagaaaggtatcatagtttggctcctatgtactac
aggggcgctgcagcggcaatcattgtctacgatatcactagcgcggattcatttacacgg
gctaaaaagtgggttcaagaacttcaaaaacaaggtaatccaaacatggtaatggcactt
gctggaaataaagctgatcttgaagacaagaggaaagtaacagcagaagaggcacgtgta
tatgctgaggagaatggtctttttttcatggagacatctgctaaaactgctgccaatgtt
aacgatgtatttcatgaaattgccaagagattgcctagagctcagcctactcaaaatcca
gcaggaatggttcttgttgacagaccagctgaaggagctcgtgctgcatcttgctgttca
taa

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