Lactuca sativa (garden lettuce): 111916279
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Entry
111916279 CDS
T05352
Name
(RefSeq) vesicle-associated membrane protein 727
KO
K08515
vesicle-associated membrane protein 7
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111916279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111916279
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111916279
Membrane trafficking [BR:
lsv04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
111916279
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111916279
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
111916279
NCBI-ProteinID:
XP_023767665
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Position
2:complement(199914084..199916015)
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AA seq
235 aa
AA seq
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MSQKGLIYSFVAKGTVVLAEHTAYSGNVSTVAVQCLQKLPSGSSKYTYSCDGYTFNFLLD
SGFVFLVVADESAGRSVPFVFLERVKDDFTKRYGACIGNDHPLADDSDDDLFEDRFSIAY
NLDREFGPKIKEHMEYCLNHPDEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVD
KTENLQFQADSFQRQGRQLRRKMWLQNLQMKLMVGGAIAVFIIIVWLMACRGFKC
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaaaggattgatttatagctttgttgcgaaagggaccgttgtattggctgaa
cacacggcctactcaggaaacgtcagcacggttgctgttcaatgcttacagaagttgcct
tcgggtagcagtaaatacacatattcatgcgacggctacaccttcaacttcttgcttgat
agtggcttcgtttttcttgttgttgctgatgaatcagcagggaggagtgtgccatttgtg
tttctggagagagtgaaagacgacttcacaaaacgttatggagcatgtattggaaatgat
caccctcttgccgacgacagtgatgatgatctatttgaagatcggtttagtattgcttat
aatcttgatagggagtttgggccaaagataaaggaacacatggagtattgtttaaaccat
ccagatgaaatgagtaagctgtctaaactgaaggctcagattacagaggttaaagggatt
atgatggacaacattgagaaggttttggatcgtggtgagaagatcgaattactagtggat
aaaacagaaaaccttcaattccaggcagatagctttcaaaggcagggaaggcaactaaga
aggaagatgtggttgcagaatcttcagatgaagctcatggttggaggagctattgcagtt
tttatcatcatagtctggctcatggcttgtaggggtttcaaatgttga
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