Lactuca sativa (garden lettuce): 111916347
Help
Entry
111916347 CDS
T05352
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
lsv04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111916347
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111916347
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111916347
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111916347
03036 Chromosome and associated proteins [BR:
lsv03036
]
111916347
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111916347
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111916347
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111916347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_1
Phage_Inh_C
Motif
Other DBs
NCBI-GeneID:
111916347
NCBI-ProteinID:
XP_023767774
LinkDB
All DBs
Position
2:complement(201966264..201971271)
Genome browser
AA seq
541 aa
AA seq
DB search
MMDMDNNGEAGCLDPELLQLNEVSPLAIKSNPYVAEKLFEQWLSLPETTPLVKSLVNNAK
AGVPLNVPGSTNSPKATSGSSIPSMFPAGSTPPLSPRSSSGSGSPRITKHRAGPSVLGSP
LRLLSEPAKELIPQFYFQNGRPPPNELKERCLFQCNQFFYGHMEGLQLHDFKPITKEICK
LPSFFSTALYKKIDVNGIGVTRDAFVEYWVHSNMLTKDIATQIFTILKQPDLRYLTHEDF
KPILRELLASHPGLEFLQNTPEFQERYAETVIYRIFYYVNRGGNGRLTLRELKRGNLIAA
MLHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDR
IFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGAVTRNEMQF
FYEEQLHRMECMAQEPVLFEDILCQIVDMVGPKDEGYFTLGDLKGSKLSGSVFNILFNLN
KFMAYESRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDAEDASNGSADVWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatggataataatggtgaagcgggttgtcttgaccctgaattgttacagctg
aatgaagtgtctcctctggctattaaatcaaatccttatgttgctgagaaactgttcgag
caatggctctctcttccagaaaccactcctttagtaaaatctttagttaacaatgcaaag
gctggtgttccattgaatgtgcctggatcaactaacagccctaaggctacttccggctct
tcaataccttccatgtttccagctggcagtacacctccactctcaccaagaagttcatct
ggttctggttctcctcgtattacaaaacatagggcgggcccatcagttttaggttctcct
ttgagattattgagtgagccagcaaaagagttaatacctcagttttactttcaaaatggt
cgtccaccaccaaatgaactaaaagaacgatgtttgtttcaatgcaaccaatttttctat
ggtcatatggaagggctacaattgcatgatttcaaaccaattacaaaggaaatttgcaag
ctgccatcttttttctctaccgctctttacaaaaagattgatgttaatggcattggtgtg
accagggatgcatttgttgagtattgggtccatagcaacatgttgacaaaagatatagct
acccaaatatttacaattttgaagcagcctgatttgagatatctaactcacgaggacttc
aaacccatacttcgtgagcttttagcaagtcatccaggtctggagttcttacaaaacaca
cctgagtttcaggagagatatgctgaaacggtaatataccgcatattttactatgtgaat
agaggaggtaatggtcgtctgaccctcagggagctcaaacgtggaaatctaattgctgca
atgctgcatgcagatgaagaagaagacataaacaaagttttgagatatttctcttacgag
catttctatgtaatatattgcaaattctgggagctggacacagatcatgattttttgatt
gataaagagaaccttataagatatggcaaccatgcattgacctacaggattgttgacaga
atattttcccaggttccaagaaagtttacgagtaaggttgaagggaaaatgggatatgag
gattttgtttacttcattttgtccgaagaggataagtcatctgagccaagccttgagtac
tggttcaagtgcatagacttggatggaaacggggcagtgacaaggaatgagatgcaattc
ttctatgaggaacagttgcatcgcatggaatgcatggctcaagagcctgttctttttgag
gacattttatgtcagatagttgacatggttggaccaaaggatgaggggtattttacactt
ggggacctaaaaggaagcaaactttctggcagtgttttcaatatcttgtttaatctgaac
aagttcatggcgtatgaaagtcgcgaccccttcctcattcgtcaggaacgtgagaatccg
acattgacagagtgggaccggtttgcacatcgggaatatatacggctttcaatggaggaa
gatgctgaagatgcgtctaatggtagtgcagatgtatgggatgaatcccttgaagccccc
ttttaa
DBGET
integrated database retrieval system
