Lactuca sativa (garden lettuce): 111916380
Help
Entry
111916380 CDS
T05352
Name
(RefSeq) protein CNGC15b
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111916380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111916380
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111916380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF4239
Motif
Other DBs
NCBI-GeneID:
111916380
NCBI-ProteinID:
XP_023767816
LinkDB
All DBs
Position
2:203473729..203476415
Genome browser
AA seq
651 aa
AA seq
DB search
MENESTKPSRFEIEQSPPATKNRRVISGRLTRVFSEDYKKIEGRIFDPRGDHVKQWNRYF
LVAALISIAIDPLFFYLPEVNDDEMCMGEDTSLKLTLTIIRSIVDVFYLIQIYVRFRTAY
DAPSTRLLGRGELVLDPFKISQRYLKRDFTLDFLASLPIPQVLTWLPIFDNSEMLSTKTS
VLYFIMFQFFIRLYLVFKLSSHIQQVTGVVAESTVAGAVYNIILFMLAAHVFGACYYLLS
IERQGICWKEVCDLEEPGCGEKFFNCRYLDDPGRASWYQSSNISNICGRDTESYEYGMIF
DAVNYGVASLDFFTKYSYCLWWGLRALSSRAEEVQASTFLAETHFCILISLTGLLLLAMV
IGTMETYLESRTERLEEYRIQQMDTELWMNHRQLPHAMRERIRKHDLHKWIKHGKVDEEA
ILDELPLDIKRDIKQHICIELVRRVPLFDQMDERTVDAICERLTPVTCTPGTCLLREGDP
TNEMLFIMHGNLDSYTTDGGRAGFWNECRIGPGDFCGEELLTWALDPRTMGALPLSTRTV
TSVAEVEAYALSSKDLKFVAKRFRKMHNKKLRHTFRVHSHQWRTWAACFIQSAWKRYRRR
KLIGMLKVKENYNYENGVGSEQRRNKRMGSETHDCIRTPVPKPKDPDYFDG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgagtcaacaaaaccttcaagatttgagattgaacaatctccaccggcgacg
aaaaaccggcgtgttataagtggaagacttaccagagtgttctcagaggactacaaaaaa
atcgaaggacgtatatttgatcctcgaggagatcatgtgaagcaatggaacagatatttc
ttagttgcagccctaatttcgatcgctattgatcctcttttcttctacttgcctgaagtg
aacgacgacgagatgtgcatgggcgaagatacttctctgaaactaactctcacaatcatt
cgatcgattgtagacgttttctacttgattcagatttacgttcgattcagaacagcttac
gatgcaccttcaactcgtttacttggaagaggagagcttgttctcgaccctttcaaaatc
tctcagaggtatctcaagagagatttcactcttgatttcctggcatctcttcctattcca
caggtcctgacatggctcccgatttttgataattctgaaatgctgagcacgaagaccagc
gtattatacttcatcatgttccaattctttatcagactctatcttgtattcaaactttca
tctcatatacaacaagtaaccggcgttgttgctgaatcgacagtcgctggagctgtttac
aatatcatcctcttcatgttggcagctcatgtgttcggagcctgttattaccttctatca
atcgaaagacaaggaatatgctggaaagaggtgtgtgatcttgaagaaccaggatgcggg
gagaagtttttcaactgtcgttaccttgatgatccaggtcgagcatcatggtatcaatca
agcaacatctcaaatatatgtggacgcgacacagagtcatacgaatacggaatgatcttc
gatgctgtaaattacggagttgcatcactagatttcttcacaaaatactcttattgtctc
tggtggggcctccgagcactaagctctcgagctgaagaagttcaggcaagtacatttctg
gcagaaacacacttttgcatactcatatccctcacaggattactacttcttgccatggtt
attggcaccatggagacatatcttgaatcaagaactgaaagattagaagaatacagaatc
caacaaatggacacagagttatggatgaaccacagacaattaccacacgcgatgcgtgag
cgtatccgaaagcacgatcttcacaaatggatcaaacacgggaaagtcgatgaagaagcg
attctagacgaacttccattagacatcaaacgagacatcaaacaacacatctgtatcgaa
ttagtcagacgcgttccactctttgaccaaatggacgagcgcacggtggatgcaatctgc
gaacggttgacacctgtcacatgcacacctggcacttgtttgttacgcgaaggcgacccc
acaaacgaaatgctattcatcatgcatgggaatcttgattcctatactacggatggcggg
cgggcgggtttttggaatgagtgccggattgggccgggggatttttgtggtgaggagctg
ctgacgtgggcgttggacccgcggacaatgggcgcgcttccgttgtccacgcgtacagtc
acgtcagtagctgaggttgaagcgtacgcgctttcctctaaggatttgaaatttgtcgcg
aagcggtttcggaagatgcataataagaagctgaggcatacgtttagggttcattcgcat
cagtggaggacttgggcagcttgttttatacagtcggcttggaaaaggtatagaaggaga
aagttgattggtatgttgaaggtgaaggagaattataattatgagaatggtgttggtagt
gaacaaaggaggaataaaagaatgggatctgaaactcatgattgtattcggaccccggta
cccaagcccaaggatccggattattttgatggatga
DBGET
integrated database retrieval system
