Lactuca sativa (garden lettuce): 111916399
Help
Entry
111916399 CDS
T05352
Name
(RefSeq) zinc finger protein JACKDAW isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111916399
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111916399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
111916399
NCBI-ProteinID:
XP_023767838
LinkDB
All DBs
Position
2:complement(204395432..204398355)
Genome browser
AA seq
492 aa
AA seq
DB search
MMSGEMFPITHHHNHQPPPPPPPPLHEAPNPNPKAISNLKKKRNLPGTPDPDAEVMALSP
KSLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEPIKKKVYICPEKSCVH
HDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTL
FSRKDSFITHRAFCDALAEESVRLTTVTPNSLGLKNEAMNESVMNPNFPHGFSGMTQFGS
GFRSDFGDQNNKPRLSLWLDQANSQLNLSPMDQMAMNSNLYMSSSSAGLADMVNVFGSSP
MTNFTNSNQIPSLSLTPEGLKEETLASLYSMNQTHQTESTGPMSATALLQKAAQMGSTRS
NPSIFGSSFGLMNSSTTSNTAVSLVNNNNNNNINIPTSLPHIATQPQVSTPMNNNSSNSS
PQARQQMIMSRNETMPPLKMMQRSFSGVDNGLTRDFLGMGGEGGRPLMPQDLVKFASYGS
TMGSMRHFASNN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggtgagatgtttcctattactcatcaccacaatcatcaaccaccacctcca
cctcctcctccacttcatgaagcaccaaaccctaaccctaaagccatctccaatctcaag
aagaagaggaatttaccaggcaccccagatccagatgctgaagtaatggcactttcacca
aaatcactaatggcaacaaaccgatttgtatgtgaaatctgcaacaaaggtttccaaaga
gaccaaaacctgcaacttcatcggagaggtcacaatctgccatggaagttgaagcaaagg
aacaataaagaacccatcaagaagaaagtctacatttgcccggaaaaatcttgtgtccac
catgatccgtcgcgagcacttggagatctcaccggaatcaagaaacattttagccggaaa
catggcgagaagaaatggaagtgtgaaaagtgttccaagaagtatgcagttcaatccgac
tggaaagctcattccaagacttgtggtaccagagagtataaatgcgattgtggaacactt
ttctccagaaaagatagtttcataactcatcgagctttttgcgatgcattggctgaagaa
agtgtgagactcactacagtgacaccgaatagccttggcctgaaaaacgaagctatgaac
gaatccgtgatgaaccctaatttccctcatgggttttcagggatgacgcaatttgggtcg
ggtttccggtctgattttggggatcaaaacaataagccaagattatcactttggttagat
caagcaaattctcagcttaatctttctccaatggatcaaatggctatgaattcgaatctt
tacatgtcatcaagctccgcaggtttagcggatatggttaatgtctttggttcctctcca
atgacaaattttacaaactcgaaccaaattccaagtttatcattgacgccagaaggtcta
aaagaggaaaccctagcttcattatactcgatgaaccaaacccatcaaaccgaatccact
ggtccaatgtctgctactgcactccttcaaaaagcggctcaaatgggttcaaccagaagc
aacccatcaatcttcggatcgagttttgggctcatgaactcctccactacatcaaacact
gcagtcagtttggtgaacaataacaacaacaacaacatcaacatccctacttctctccct
catatcgcaactcaaccacaagtttcgactccaatgaacaacaattcatccaattcgagt
cctcaagctcgacaacaaatgatcatgtcaagaaatgagacaatgccgccattgaagatg
atgcagcgaagctttagtggagtcgataatggattaacgagagactttttgggcatggga
ggagaaggtggccggccattgatgccacaagatctagtgaagtttgcgtcttatggttca
acgatgggatcaatgaggcatttcgctagcaataattaa
DBGET
integrated database retrieval system
