Lactuca sativa (garden lettuce): 111916401
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Entry
111916401 CDS
T05352
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111916401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111916401
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111916401
03012 Translation factors [BR:
lsv03012
]
111916401
04131 Membrane trafficking [BR:
lsv04131
]
111916401
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111916401
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111916401
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
111916401
Translation factors [BR:
lsv03012
]
Eukaryotic type
Elongation factors
111916401
Membrane trafficking [BR:
lsv04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
111916401
Exosome [BR:
lsv04147
]
Exosomal proteins
Proteins found in most exosomes
111916401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
SRPRB
AAA_22
Microp_apicomplexa_10
Motif
Other DBs
NCBI-GeneID:
111916401
NCBI-ProteinID:
XP_042755374
LinkDB
All DBs
Position
2:204829384..204831891
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQLNEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALVEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKITKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaaggttcacatcaacatcgttgtcatcggccatgtcgactccggaaaa
tcaaccaccaccggccacttaatctacaagctaggaggcatcgacaagcgtgtgatcgaa
agattcgagaaagaagctgctgagatgaacaaacgttccttcaaatacgcatgggtcctc
gacaaactcaaagctgaacgcgaacgtggtatcaccattgacatcgctttatggaaattc
gaaaccaacaagtactactgcacagtcatcgacgcccctggccaccgtgacttcatcaag
aacatgatcaccggaacttctcaagccgattgcgctgtcctcatcatcgactccaccacc
ggtgggtttgaagctggtatttccaaagatggtcaaacccgtgaacacgcccttttagct
ttcacactcggtgtcaggcaaatgatctgctgttgcaacaagatggatgctactactccg
aaatactccaaagctagatacgatgaaatcgttaaagaagtttcttcatacttgaagaaa
gtcgggtacaacccggagaagattccattcgttccaatctccggtttcgaaggcgacaac
atgatcgaaaggtcaacaaatcttgactggtacaagggccccactctcctcgaagcactc
gaccaactcaacgaaccaaaacgcccatccgacaaacccctccgtctccctcttcaagac
gtttacaaaatcggcggaatcggaactgttccagtgggtcgggtcgaaaccggtgttatc
aaaccgggtatggtagtcaccttcggtccaaccgggctcacaactgaagtcaaatctgtt
gagatgcaccacgaggcgcttgtggaagctttacccggtgataatgtcgggttcaatgtg
aaaaacgtggctgtgaaggatttgaaacgtgggtatgttgcttcgaattcgaaagatgac
ccggctaagggtgcggctaattttactgctcaggttattattatgaaccacccgggtcag
attggaaacgggtatgcaccggttcttgattgtcatacttctcatattgctgtgaagttt
gctgagctgttgactaagattgaccggaggtctggtaaggagctcgagaaggaacctaag
tttttgaaaaatggtgatgcggggatggtgaagatgattccgactaagccgatggtggtg
gagactttctcggagtatcctccgttgggtcggtttgcggttagggatatgaggcagacg
gtggctgttggtgtgattaagagtgtggacaagaaggatccgaccggggctaagattacc
aaggcggcggctaagaagaaatga
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