Lactuca sativa (garden lettuce): 111916610
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Entry
111916610 CDS
T05352
Name
(RefSeq) ubiquitin C-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111916610
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsv01002
]
111916610
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111916610
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111916610
Peptidases and inhibitors [BR:
lsv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111916610
Ubiquitin system [BR:
lsv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111916610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH_2
MATH
UCH_1
RA
Malt_amylase_C
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
111916610
NCBI-ProteinID:
XP_023768046
LinkDB
All DBs
Position
1:70250412..70258158
Genome browser
AA seq
1128 aa
AA seq
DB search
MTMMTPQPLDQEDEEMLVPHTELVEGPLALDGTPPVEGPRPMEVMGQAEVVSTAENQAAD
ETQASRHTWVIENFSRQTNKKLYSDIFVVGGFKWRVLIFPKGNNVENLSMYLDVADSSTL
PYGWSRYAQFSLAVVNQIHNKFTMKKDTQHQFHGRESDWGFTSFMPLSDLYDPSKGYLVN
DTCIIEADVAVRKVADYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHM
PTTENDMPSGSIPLALQSLFYKLQYNETSVATKELTKSFGWDTYDSFLQHDVQELNRVLC
EKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASF
DKYVEVERLEGDNKYQAEEHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDR
YEFPLELDLDREGGKYLSPDSDKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFK
FDDERVTKEDLKRALEEQYGGEEELPQTNPGYNNAPFKFTKYSNAYMLVYIRESDKEKII
CDVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIRVAREGDLLEQMGKDIYFDLV
DHEKVHSFRIQKQMPFNLFKEEVAKEFGIPVQCQRFWIWAKRQNHTYRPNRPLTPQEETQ
SVGQLREASNKNNSAELKLFLEIEIGPDLKPLPPPEKTKDDILLFFKLYDPEKEQLRFVG
RSFVKNFGKPIEIIPKLKELAGFSPDEEIELYEEIKFDPCVMCERLDKSASFKSSQIEDG
DIICFQKLHQALAVEKYRHPDVPSFLEYVKNRQIVHFRSLDRPKEDDFSLELSKSHTYDD
VVERVAQKLGLDDPSKIRLTPHNCYSQQPKPHPIKYRVADHLLDMLVHYNQISDILYYEV
LDIPLPELQCLKTLKVVFHHAKKEEPVIHNIRLPKQSTVGDVLNELKTKVELSHPNAELR
LLEVFYHKIYKIFPLTERIENINDQYWTLRAEEIPEEEKDLGPTDRLIHVYHFTKETAQN
QMQVQNFGEPFFLIIHQDETLGDVKLRIQKKLQVPDDDFSKWKFAFLSLGRPEYLEDSDI
VSSRFQRKDVYGAWEQYLGLEHPDTTPKRPFTANQNRHTYEKAVKIYN
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgatgactccacaaccgttagatcaggaagatgaagagatgcttgtgccacat
acagagctagtggaaggtcctcttgctttggatggcactccacctgttgaaggcccccgg
cctatggaagtcatgggtcaagcagaagttgttagcactgcagagaatcaagcagctgat
gaaactcaggcatctaggcatacatgggtaattgagaatttctctcgtcagaccaacaaa
aagctttattcagatattttcgtggttggtggatttaaatggcgtgtgcttatattccca
aagggaaacaatgtggaaaatttgtccatgtatctagatgtggctgattcctcaaccttg
ccatatggttggagtagatatgcccaattcagcttggctgtggttaatcagattcacaat
aagttcacaatgaaaaaagacacacaacatcagtttcatggaagggaaagcgattggggt
ttcacatcttttatgccacttagtgatctatatgaccccagtaaaggctacctagtgaac
gacacatgtattattgaagctgatgtggcagtacgaaaagtggctgattattggagttat
gactcaaagaaggagactggctatgttgggcttaagaaccaaggagcaacttgttacatg
aactctctccttcaaactttgtaccatattccttactttagaaaagctgtgtatcatatg
ccaacaacagaaaatgacatgccatcagggagtattcctcttgctcttcaaagcttattt
tataagcttcaatataacgaaactagtgtcgcgacaaaagaattgacaaaatcttttgga
tgggatacatatgattctttcttgcaacatgatgtgcaagaacttaatagggtgttatgt
gaaaaacttgaagataaaatgaagggtacagttgtagaaggtacaatacagaagttattt
gaaggacaccatatgaattacattgaatgcatcaatgtggacttcaagtcaactagaaaa
gaatcgttttatgatcttcaacttgatgtgaaaggctgtcgtgatgtttatgcttctttt
gataaatatgttgaagtggaaagacttgagggtgacaataaataccaggctgaagaacat
ggtttgcaggatgctaggaagggagtcttatttattgatttcccgcctgttcttcaactt
caactgaagcgctttgagtatgatttcatgagggatacaatggtaaaaataaatgatcgt
tatgaatttccattagagctggatcttgatagggagggtggcaagtatctatctcctgat
tcagataaaagtgttcgcaacctttatacccttcacagtgtattggttcatagtggtggg
gtccatggtggacactactatgcattcatcaggccaaccctatcagatcaatggttcaag
tttgacgatgagagggttacgaaagaagatttgaaaagggcattagaagagcaatatggt
ggcgaggaggagctgccccagaccaatcctggctataataacgctccgtttaaatttaca
aaatactcaaatgcatacatgcttgtgtatatacgtgagagtgacaaggagaagataatt
tgtgatgtggacgagaaagatattgcagaacacctaaggataaggttgaagaaagagcaa
gaagagaaggaagacaagagaagatacaaagcccaggctcatctttacactattataagg
gttgcacgtgaaggtgatctattagaacagatggggaaagatatatattttgatcttgtc
gatcatgaaaaagtgcacagtttccgtatccaaaaacagatgccgtttaaccttttcaag
gaggaggtggcaaaagaatttggtatacctgttcaatgccagaggttttggatatgggca
aagaggcagaatcatacataccgtcccaatcgccctttgacaccacaagaggaaacacaa
tctgttggccaattaagggaggcttctaataaaaacaacagtgctgaactgaaattgttc
ttggagatagagattgggccggatttgaagcctctcccaccacctgaaaaaacaaaagat
gatatacttcttttcttcaagctttatgaccctgagaaggaacaacttcgttttgttggt
aggtcttttgtgaagaattttggtaagccaattgaaattataccaaagttgaaagaattg
gctggatttagtcctgatgaagaaattgaactttatgaggaaataaaattcgacccatgt
gtcatgtgtgagcgtctcgacaagagtgcttcgtttaaatctagccagattgaggatggg
gacatcatttgcttccagaaacttcatcaggctcttgctgtagagaaatatcgacatcct
gatgttccttcatttttggaatatgtgaaaaatcgtcagatagttcattttcgatctctg
gatagacctaaggaggatgatttctctctggaattgtcaaagtcgcatacatatgatgat
gtggtggaaagagtggctcagaaacttggtctggatgatccatcaaaaatcaggcttact
cctcataactgttattctcagcaacccaagccccaccccattaaatatcgagttgcagat
catctgctagacatgctggttcactacaatcagatttctgatattctgtactatgaagtg
ttggatattcctctgccagagttgcaatgtctgaaaactctcaaggttgtttttcatcat
gccaagaaggaagagcctgtaattcataacatcaggttgcctaagcagagcactgttgga
gatgttcttaatgagttaaagacaaaggtggaactgtcacatccaaatgctgaactgaga
ctgcttgaagtattctatcataagatttacaagatctttccactaacagagagaattgag
aatataaatgatcagtactggacattacgtgcagaggaaattcctgaagaagagaaagat
ctgggacccacagaccggttgatccatgtttaccatttcacaaaagagacggcacagaac
cagatgcaagtacaaaactttggagagcctttctttctgataattcaccaagatgaaact
ttgggtgatgtcaaacttcgtattcagaagaaattgcaggttcctgatgatgacttttcc
aagtggaagtttgcgtttttatcactcggacgacctgagtatcttgaagattccgacatt
gtgtctagccgtttccagagaaaagatgtttatggcgcatgggagcagtaccttggattg
gaacacccagataccactccgaaaaggccattcacagctaaccagaaccgtcacacatat
gagaaggcggttaaaatatacaactag
DBGET
integrated database retrieval system
