Lactuca sativa (garden lettuce): 111916735
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Entry
111916735 CDS
T05352
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111916735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111916735
Membrane trafficking [BR:
lsv04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
111916735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Laminin_I
DUF5741
Spectrin
Pox_EPC_I2-L1
DUF5798
OppC_N
DUF2116
Motif
Other DBs
NCBI-GeneID:
111916735
NCBI-ProteinID:
XP_023768160
LinkDB
All DBs
Position
1:complement(16811943..16815826)
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AA seq
222 aa
AA seq
DB search
MSQVFEGYERQYCEISANLSHICASASVLDGEQKKQRVSEIAGGIDEADTLLRKMDLEAR
STPAGTKASLLAKIREYENDLNSLKTELKRLQPSNPNANAARDELLESGRADAMQVSADQ
RGRLMMSTERLNKSTDRVKESRRTMMDTEELGVSILHDLHQQRQSLLHANTTLHGVDDTI
GRSKKLLTNMSRRMNRNKWILASIITILLLAVICILYFKLTR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggtattcgaaggatatgagcgtcaatactgcgagatttcagccaatttatca
catatatgtgcgtcggccagtgttcttgatggagagcagaagaaacagagggtttcagaa
atagcaggaggaatagacgaggccgacactctgttacgcaaaatggaccttgaagcaagg
agcacaccagctggcaccaaggcatcgcttcttgccaagattcgtgaatacgaaaacgac
ctcaacagcctcaaaactgaattgaaaagactccagcccagcaaccctaatgctaatgct
gctcgagatgagctacttgaatcaggaagagcagatgcaatgcaggtgtcagctgatcag
agaggaagactgatgatgtccaccgagaggttaaacaagtcaaccgacagagtcaaggaa
agtagaagaacaatgatggacaccgaagagctcggtgtttcaatcctccatgacttacac
cagcaacgccagtctctcctccatgcaaacaccactctccatggggtggatgatactatt
ggaaggagcaagaaacttctgacaaatatgtcaaggagaatgaacaggaacaaatggatc
ctggcttccattattacaatcctacttcttgcagtcatttgcatcctttacttcaagctc
acccgttag
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